Pseudomonas syringae BRIP39023, A988_03753

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae BRIP39023 genomic scaffold scaffold3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATGATGCAATCCGACCTGGCGAAGATCGGCATCAAGATCGACATCCGTGTCATGGAATGGGGTGAAATGCTCAAACGTGCCAAGAATGGCGAACATGACA TGGTGTCTGCTGGCTGGGCAGGCGACAATGGCGACCCTGATAACTTCCTGACTCCGATGCTGAGCTGTGAAGCGGCGAAAAACGGCGAGAACTACGCCCG CTGGTGCAACGCCGATTTCCAGAAGCTGATCGATAAGGCGCGTGAAACAGTGAACCCCGAGGAGCGCGCTGGGCTCTATGAACAGGCCCAGGCCATATTC AACAAGGATCAGCCATGGATCAGCATGGCTCACACCAGAATGTTCACCGCCATGCGTAAAAATGTGGAGGGCTACCAAATCAGCCCGCTCACAACCAACA ACTTCGCCACTACCCAGGTGAAGTAGAAAAACAATCCGGCGAGCTCATAACCCGAGACTCGCCGGAGCATGCCTAACCGGCTGATGAGGTACACACCAAG
DNA Sequence for Gene
>A988_03753
ATGTTTAGTTTTATCGCCCGCCGAGTGGGGTTGCTGATACCCACTTTCTTCGGCATCACCTTATTGACCTTCGCCCTGATTCGTCTGATTCCGGGCGACC CGGTCGAAGTCATGATGGGTGAGCGCCGTGTCGATCCGGAAATGCACGCTCAGGCCATGGAACGTCTGGGTCTGAACAAACCCCTCTACGCCCAGTACAT CGATTACATCGGCAAGCTCGCCCAGGGCGACCTCGGTGAATCGTTGCGTACACGCACCAGTGTCTGGTCCGAATTCACTTCGCTGTTCCCGGCAACCCTG GAGTTGTCGCTGGCGGCGCTGATTTTCGCGGGTATTCTCGGCCTGCTGGCCGGGGTGATCGCCGCACTCAAGCGAGGGTCCCTGTTCGACCATGGGGTCA TGGGGATTTCCCTCGCCGGCTATTCCATGCCGATCTTCTGGTGGGGCCTGATCCTCATCATGTTCTTCTCGGTAACACTGGGTTGGACCCCTGTTTCCGG GCGGATCGACCTGCTGTACGACATTCCGCCGGTCACCGGCTTCATGCTGATCGACACGCTGCTGAGTGACGAACAGGGTGCGTTTCTCGATGCCCTGCAC CACATGATTCTGCCGGCCATCGTGCTGGGTACCATCCCGCTGGCGGTGATCGCCCGGATGACCCGCTCGTCGATGCTCGAAGTATTGCGGGAAGACTACG TGCGAACCGCCCGCGCCAAAGGCCTGTCGCCTGCCCGTGTGGTCTTCGTTCACGGCCTGCGCAACGCGCTGATTCCGGTACTGACCGTGTTCGGCCTGCA AATCGGTACGTTGTTGGCCGGTGCGGTACTCACCGAAACGATCTTCTCCTGGCCGGGTATCGGCAAGTGGTTGATCGAAGCCATTGGCGCCCGGGACTAC CCGGTCGTGCAAAACGGCATTCTGCTGATCGCCTGTCTGGTGATCCTGGTCAATTTCGTGGTGGATATCCTCTACGGCTTTGCCAACCCACGCATTCGTC ACCAGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GATCATCGATATGAGCACCCCTACTCCTGCGGTAGCAGTCGATCAAAGCCTGCTTTACCCATCCCCGTACAAAGAATTCTGGCAAGCCTTCTCGAAAAAC AAAGGCGCGGTTGCCGGCCTGCTGTTCATGACCCTGATCGTGTTCTGCGCCCTGTTCGCGCCCTGGGTTGCCCCCCATGACCCGAGCGAGCAATACCGCG ACTTCCTGCTCACGCCGCCGGTATGGCTTGAAGGCGGTCAATGGCAATTCATCCTCGGCACCGACGAACTGGGCCGCGACCTGCTGTCACGCCTGATCCA GGGTTCGCGCCTGTCGCTGCTGATCGGTCTGGCATCGGTGGTCATGTCGCTGATCCCAGGCATTCTGCTGGGCCTGCTGGCGGGCTTTTTCCCGCGCATT CTGGGCCCTTCGGTGATGCGTCTGATGGACATCATGCTGGCCCTGCCCTCGCTGCTGCTGGCTGTGGCCATCGTGGCGATCCTCGGCCCTGGCCTGATCA
Amino Acid Sequence
>peptide ABC transporter permease
MFSFIARRVGLLIPTFFGITLLTFALIRLIPGDPVEVMMGERRVDPEMHAQAMERLGLNKPLYAQYIDYIGKLAQGDLGESLRTRTSVWSEFTSLFPATL ELSLAALIFAGILGLLAGVIAALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVTLGWTPVSGRIDLLYDIPPVTGFMLIDTLLSDEQGAFLDALH HMILPAIVLGTIPLAVIARMTRSSMLEVLREDYVRTARAKGLSPARVVFVHGLRNALIPVLTVFGLQIGTLLAGAVLTETIFSWPGIGKWLIEAIGARDY PVVQNGILLIACLVILVNFVVDILYGFANPRIRHQR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site