Pseudomonas syringae BRIP39023, A988_03393

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae BRIP39023 genomic scaffold scaffold3, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GGCCTGTTGGAAACGTTTCTCCGGAAGCGCTTCCTTGCACAAAAGGATTGCCCACATGGCACTCAGCGTTGAAGAAAAAGCTCAGATCGTAACCGACTAC CAGCAAGCTGTTGGTGACACTGGTTCGCCAGAAGTGCAAGTTGCACTGCTGACCGCCAACATCAACAAACTGCAAGGCCACTTCAAGGCCAACGGTAAGG ACCACCACTCGCGTCGTGGTCTGATCCGTATGGTAAACCAGCGTCGCAAGCTGCTGGATTACCTGAAAGGTAAGGACGTTAGCCGTTACAGCGCCCTGAT CGGTCGTCTGGGTCTGCGTCGCTAATAACGACGTTGCTAGAGGTTGGTTGTCTGTCACGATCCGTCGGGTTTGCCCGGTGGTTCTGGCAGGCTCCCAGCC TCAAGTTTTATCTGGGCTGTGGAAGGGGCCGATTCCCCACGCTGCCCAAGAATTCGCAAGAAACCAGTTCCCCAAGAGCCACAAAGAAAGGTAGGAAACC
DNA Sequence for Gene
>A988_03393
GTGAACCCGGTAATCAAAAAGTTTCAGTTCGGTCAATCGACCGTAACCCTCGAGACAGGCCGTATCGCCCGTCAAGCCTCTGGTGCAGTATTGGTCACCG TTGACGACGACGTCAGCGTACTCGTGACTGTGGTCGGCGCCAAACAGGCTGACGCTGGCAAAGGCTTCTTCCCTCTGTCCGTGCACTATCAGGAAAAAAC CTACGCTGCCGGCAAGATCCCTGGCGGTTTCTTCAAGCGTGAAGGCCGTCCTTCCGAGAAAGAAACCCTGACTTCGCGCCTGATCGACCGCCCGATCCGC CCGTTGTTTCCAGAAGGCTTCATGAACGAAGTGCAGGTTGTCTGCACCGTCGTCTCCACCAGCAAGAAAACCGATCCGGACATCGCTGCGATGATCGGTA CTTCGGCTGCCCTGGCCATCTCCGGTATCCCGTTTGACGGTCCGGTTGGTGCTGCCCGCGTTGCTTTCCACGAAAGCACCGGCTACCTGTTGAACCCGAC TTACGAGCAGCTGCAGGCTTCGAGCCTGGACATGGTCGTTGCCGGTACTTCCGAAGCCGTCCTGATGGTTGAATCGGAAGCCAAAGAGCTGACCGAAGAC CAGATGCTGGGCGCTGTGCTGTTCGCGCATGACGAATTCCAAGTCGTGATCAACGCCATCAAGGAACTGGCTGCCGAAGCCGCCAAGCCTACCTGGGCCT GGCAGCCTAAGCCTGAAGCGACTGAACTGCTGAGCGCTATCCGCTCCGAGTTCGGCGAAGCGATCTCCCAGGCTTACACCATCACCGTCAAAGCCGACCG TTATGCGCGTCTGGGCGAGCTGAAAGATCAGATCGTTGCCAAACTGGCTGTGGAAGAAGGCAGCCCGTCTGCCAGCGAAGTCAAAGCCGCTTTCGGTGAA ATCGAATACCGCACCGTTCGCGAAAACATCGTTAACGGCAAGCCGCGTATCGATGGCCGTGACACGCGCACCGTACGTCCTCTGAACATCGAAGTCGGTG TTCTGCCAAAGACCCACGGTTCGGCACTGTTCACCCGTGGCGAAACTCAGGCGCTGGTTGTTGCCACGCTGGGTACTGCACGTGACGCACAGCTGCTCGA TACGCTCGAAGGCGAGAAAAAAGACCCCTTCATGCTGCACTACAACTTCCCTCCGTTCTCGGTGGGCGAGTGTGGCCGCATGGGCGGCGCAGGTCGTCGT GAAATCGGTCACGGCCGTCTGGCCCGTCGCAGTGTCCAGGCCATGCTGCCAGGCGCAGACGTGTTTCCGTACACCATCCGTGTTGTGTCGGAAATCACCG AGTCCAACGGCTCCAGCTCCATGGCTTCGGTCTGTGGTGCTTCCCTGGCTCTGATGGACGCTGGTGTGCCGATGAAGGCGCCGGTTGCCGGTATCGCCAT GGGCCTGGTCAAGGAAGGCGAGAAGTTCGCCATTCTGACCGACATCCTGGGTGACGAAGACCACCTGGGCGACATGGACTTCAAGGTAGCCGGTACCTCC AAAGGTGTTACCGCGCTGCAGATGGACATCAAGATCAAAGGCATCACCGAAGAAATCATGGAGATCGCCCTGGGCCAGGCCCTGGAAGCTCGCCTGAACA TCCTCGGTCAGATGAACCAGATCATTGGTCAGTCGCGTAACGAACTGTCGGCCAACGCTCCGACCATGATCGCGATGAAGATCGACACCGACAAGATCCG TGACGTGATCGGCAAGGGTGGCGCAACCATCCGTGCCATCTGCGAAGAAACCAAGGCTTCGATCGACATCGAAGACGACGGCTCGATCAAGATCTTCGGC GAGTCCAAGGAAGCGGCTGAGGCAGCACGTCAGCGCGTTCTGGGTATCACCGCAGAAGCGGAAATCGGCAAGATCTACGTCGGTAAGGTTGAGCGCATCG TCGATTTCGGCGCATTCGTCAACATCCTGCCGGGCAAGGATGGTCTGGTTCACATCTCGATGCTGAGCGATGCTCGCGTAGAGAAAGTGACCGATATCCT CAAGGAAGGTCAGGAAGTCGAAGTACTGGTACTGGACGTGGATAACCGCGGCCGTATCAAGCTGTCGATCAAGGACGTAGCCGCAGCGAAAGCGTCGGGC GTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTGATCTGAGCAGCAGATGAAAAAGGACTCTTCGGAGTCCTTTTTTTATGAGCGCAATTAGAGGCTTACACATGGAGCATGCAAACTGCTCGGTACAAAC ATGCATCTTGCAAGCCCGGGTTTGGGCGAACGGGCAATCTGCACGACTCAGCAAAATAAATAAAAACATAACTAATTGATTTTAAAGGTTATTTTGGCTG TCTCATTTTTGGCACACCGCTTGCGATATACCTGTTAACCCTGCCACCACATGCTGGTGCAGATTTTGAGAAAAACAGGAGTTATCGTATGAAGAAGTTC GCTATTGCCGCTGCTACCGCTACTGCCCTGACTCTGACCATGGCCAACGCTGCTTTCGCACAGACCTCGGCTCAAGCGCCAATGGTTCTGGCAGCTAACA CCACTACTCAAGAAGTCAAAGAAGACACTTCTGACACCTGGATCACCACCAAAGTCAAAGCTGATCTGCTGACTGAAAAAGGCATCCCAGGTTCGGACAT
Amino Acid Sequence
>polynucleotide phosphorylase/polyadenylase
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADAGKGFFPLSVHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIR PLFPEGFMNEVQVVCTVVSTSKKTDPDIAAMIGTSAALAISGIPFDGPVGAARVAFHESTGYLLNPTYEQLQASSLDMVVAGTSEAVLMVESEAKELTED QMLGAVLFAHDEFQVVINAIKELAAEAAKPTWAWQPKPEATELLSAIRSEFGEAISQAYTITVKADRYARLGELKDQIVAKLAVEEGSPSASEVKAAFGE IEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTARDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRR EIGHGRLARRSVQAMLPGADVFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAILTDILGDEDHLGDMDFKVAGTS KGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQIIGQSRNELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG ESKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARVEKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASG V
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site