Pseudomonas stutzeri TS44, YO5_05971 (ihfB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri TS44 Contig00040, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGGCTCCGAAGATGCAAACACCCAGGGTGCGATACAGGGGCAGGCGCGCAGTGCGCGCTCGAAGGGATACAGAACGGTAACGAGATATGAGCATGCAGGC GTTCAACATATATATAGGATAAGAGAACAAAGGCCCCGATGACCGGGCCGGTGAGCGAGTAGACGATGCAGCGATTGGCTGCCGGCACGCCGCCGGGGCG GTCCGAGAGCGGGTAGAGGGGCGGCAAAGATGCTTATGCGCAGATGTGGTTCTGCCGCGCCGTCCGGGTAGTCCGTCAGGGGACAGACAGTTCGCGGTAA CCCGAGTTCCCCGGCAGCGGAAGCTGAATCATGCCGTTCGAGAGCGCGTCGACATGTTCCAGAGAACCACTCAATCGCGTACGCGCCATACAAAGAACGC CGCTGCCCGTCAATCCCGTTGGGCTGTTCAAAGTCTGAACAACATGCTACAAACGACCGCAACCCGAATCATCTAGCCGCTTGAAAACGAAGGGAAAACC
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| DNA Sequence for Gene |
>YO5_05971
|ihfB
ATGACCAAGTCGGAGTTGATCGAGCGTATCGTCACCCAGCAGGGGATGCTTTCTTCGAAGGATGTCGAGCTGGCCATCAAGACCATGCTCGAGCAGATGG CACAGGCGCTGGCCACTGGCGACCGCATCGAGATTCGCGGTTTCGGCAGTTTCTCCCTCCACTATCGCGCCCCCCGCGTGGGCCGAAATCCCAAGACCGG CCAATCGGTCAGCCTGGACGGCAAGTTCGTCCCGCATTTCAAGCCGGGGAAGGAACTGCGGGATCGGGTGAATGAGGAAGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCTTCGAAGGCGCGGTGCAAATTTTTGTGAGGTGCGTCGCGTGCTCCAGAAAAAATGCGCTAATTCTCTATAACGTAAGGAACTTTTTGTCGCTATCCC ATACGAATCCCGCTCCGATTGCTTTACAGCCCATAACAAGGAAACCGGATGATCGTGCAGCCCCAGCCTCTGGCAAATGATGAAATTGATCTGGTTGAGC TATTTCGTGCGCTCTGGCGACAACGCCTCCTTATCATTGGCGTGACGTTCGCAGCAACCTTGGTCGCGGCTGCCTACGCTTTTCTCGCGACTCCGTACTA CCAAACCAAAACCTACCTTCGACCTGTTCCGCAGAGCATGCTTGATCAGCTCAACGAGACCGGTATCTACAAGCTCACGCCCGAGGATGCACTCAGCAGG GTGGCGAGTGGGCTTTCATCCTACGACAAACGTCTGGACTATTTTCTTAGCAACCAGGAGCTGTTCCAGGCGATTGAGCCGAAGGGGGACTCACCTGAGC
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| Amino Acid Sequence |
>integration host factor subunit beta
MTKSELIERIVTQQGMLSSKDVELAIKTMLEQMAQALATGDRIEIRGFGSFSLHYRAPRVGRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEEE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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