Pseudomonas stutzeri TS44, YO5_00710
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri TS44 Contig00020, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATGTCTCGTTTTTCACATCTGACAGCGGCACTTGCGCTTGCTGGCTCCCTTGCACTGGCTTCGTTGCCAGCGGCCGCAGTCGAGTTGCCGAGCCAGCCGG TGCTCACCCTTGCTGCCGCACAACAGGTCCTCTCAGCTGCGCAATCCAAGGCACAAGCGTCCGGTTGGCCGTGCGTGATTGCCGTTGTCGACAGCTCCGG TTCGCCCATCCTTCTGCTGCGCATGGACAACGCGGCTGTGCCTGCAGGTGTAGAACTCGCTCCAGGTAAGGCGCGCACCGCTGCGCTCTTTCGACGTCCC AGCGGTGCGCTCGAGGATGCGATCAACGGTCCTCGACCTGCCGCCATCACCGCCCAAGGTTTCGTCCTGATGCGTGGCGGACTTCCTATCGTCGTCAACG GACACACTGTTGGAGCGATCGGAGTATCCGCGGACACACCCCAGCATGATGAAGAAATCGCTCAAGCCGGCATAGCGGCACTCAAATAGCCGATCCCACA
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| DNA Sequence for Gene |
>YO5_00710
ATGAATAATTCAGTTACCCGCCCAGCGCTGAGGAAAGAGACTGCAATTCTCCTTGTCGCGTCAACCGGCTGCGCCATGACTGTCCTCGACACAAACGTCG TAGGTATCGTTCTGCCGACCATCGCCAGGGATCTACAGGCCTCGTTTGCCGAAGTAGAGTGGGTCATCAGTACCTATGTTCTATGCTTCGCAGCCCTACT CCTTCCGGCTGGATCCATCGCTGACCGCTATGGCCGACGAAGGGTCTTTCTTTTCGGGATAGCACTCTTTGCAATTGCATCGCTGGCTTGTGGTTTGGCG CCTTCGGCACCGGGGCTGTATCTGGCAAGGGCGGTGCAGGGAGTGGGAGCCGCGTTCCTTCTCGCCCCTGCCTTGGCCATCATCGGACACACATTCCACG ATGAGAACGCACGTAGCCGTGCGTGGGCGGTATGGGGTGGCATCATGGGGCTCACGATGGTCGTCTCGCCGCTGATTGGTGGAGCGATCAGCAGCGTGTT CGGCTGGCGCTGGGCTTTCCACATCAACCTTCCGATCTGTGTACTGCTGGCGATAGCGGTACTTACGCTGGTGGAGGAGTCGCGTGACCCAACACCCCGG ACCTTGGACATCCCGGGAATCGTTCTCTTCGCACTAGCAATGTTTAGTGTCACCTGGGCCCTGATCGTCGGACCCAGCCACGGTTGGATGAGCGGCCCAG TCTTGTTGCGAATTGCGGGCGGCCTGTTGTTGTTCGCTGTCTTTGTCTGGGTCGAACGGCGTCGCACTCATCCGATGCTCGATCTTGAGCTTTTCACGGC TTGGCCCTTCGTGGGAGCCGTGTTGGCGATGTTCGCCTACGCCTCGTCGGCCCAGGTCATGGCATCGCTGCTACCGCTCTTTCTGCAAAACGGCCGTGGC AATGGAGCACTTGCGGCGGGAATCGGCATGTTGCCCTTCGCTCTTGCGATGCTGATTTTTCCGCAAGTCGGCCGGCGACTTTCACCCTATTTGGACAGCT CACGCATCTTGACTCTGGGTCTCGCAATCGTTGCACTTGGTAACTTGACCATGATGTTCGCCGCCCGACAACAGGGAGCGTTGTTGCTGATCGTCGGGAT GGCAATCCTGGGAACAGGTGGCGGGCTGCTCAACGGCGAAACGCAGAAGGCCATCATGGGTACGGTGCCCAGGCATAGGGCAGGAATGGCATCCGGCATT AGCACCACGTCACGTTTCTCGGGAATTCTGCTCGGCTTTGCCGGGCTGGGAGCGGTGCTAGCCAGCGGCACACGCTCTGCGCTCGAACAGGCAATGGCAG CGGAGCGTTTGCCGATAGAACCTGGATTCGTCGACAGCATCGCAGCGGGAGATCTTGAACGTGCCGTCCAGGCTTATCCACCCGACCTCGCGGCCACGAT TACTTCGCTTGCACAGAATGGCTATAGCGCGGGATTCTCACACGCCTTTTTGACGGCAGCGATCATTGCGCTTGCTTCGGCGGTGGTCGTGTTCGTCACG ATGCGGCGCCGAGAGATAGGTACGGATTGTCAGGTGGGACTTCAACGAAGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTGCGGATCTGACAGAAGGTAGCCGTGTAAACGCCTTGACTTCCTGGGTCCTGTCACTTCGCATGTCCAGATGTTAAGACCGCTGGATTGCTTGCGATG TTGCTGCAGGCGCTCGAAGCGTTTTTGCACCCATTGCCAATCCTGCTGGTTCTCTTGCTTGGCCAACATTCCGACCTGCAGGTGTTCCTGCGCATAGCGC TGGAACACCCCCGGGCTGACCAGATAGGCTGTCTCGCTCACGGTATGCACGAGCGCCTTCGCGTCGTTGATGATGAGTCGTCGCGAGACAATACCTTGCT TCAGCCACACCATGAAATGTTCGCCCGACGGCTTCGCTGCCGTCGAAGAAGGTGCACCAGTCGATATGGATGACGAAGGAATTGCTGTAGCAGCAAGCGC TGCCATGTGAGCATCGGGCTGCGCGGAATGGTCCGGCCCCGAGACGGCCTCTGAATCCTGCCCGGCACCGGACGCGCCGCTCAACCCCACCATTGACAGC
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| Amino Acid Sequence |
>major facilitator transporter
MNNSVTRPALRKETAILLVASTGCAMTVLDTNVVGIVLPTIARDLQASFAEVEWVISTYVLCFAALLLPAGSIADRYGRRRVFLFGIALFAIASLACGLA PSAPGLYLARAVQGVGAAFLLAPALAIIGHTFHDENARSRAWAVWGGIMGLTMVVSPLIGGAISSVFGWRWAFHINLPICVLLAIAVLTLVEESRDPTPR TLDIPGIVLFALAMFSVTWALIVGPSHGWMSGPVLLRIAGGLLLFAVFVWVERRRTHPMLDLELFTAWPFVGAVLAMFAYASSAQVMASLLPLFLQNGRG NGALAAGIGMLPFALAMLIFPQVGRRLSPYLDSSRILTLGLAIVALGNLTMMFAARQQGALLLIVGMAILGTGGGLLNGETQKAIMGTVPRHRAGMASGI STTSRFSGILLGFAGLGAVLASGTRSALEQAMAAERLPIEPGFVDSIAAGDLERAVQAYPPDLAATITSLAQNGYSAGFSHAFLTAAIIALASAVVVFVT MRRREIGTDCQVGLQRR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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