Pseudomonas pelagia CL-AP6, K787_RS0114940

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00260
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1297 1402 7.6E-8
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 647 780 7.7E-24
Coils Coil Coil - - 1507 1527 -
SMART SM00260 chew_2 IPR002545 CheW-like domain 1786 1930 1.6E-29
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1310 1380 4.06E-9
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1778 1791 1.3E-10
Gene3D G3DSA:3.40.50.2300 - - - 1961 2080 4.1E-39
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1310 1404 0.45
MobiDBLite mobidb-lite consensus disorder prediction - - 836 859 -
MobiDBLite mobidb-lite consensus disorder prediction - - 603 644 -
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1610 1791 1.7E-35
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 648 739 1.35665E-6
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1012 1143 5.8E-6
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1013 1131 8.48E-6
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 10 108 6.0E-7
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 873 964 1.49589E-7
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 443 557 1.55E-12
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 7 129 6.28E-22
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 1868 1930 1.9E-18
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1754 1772 1.3E-10
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1959 2072 1.1E-36
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 14 122 8.4E-11
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1609 1793 2.8E-62
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 873 964 1.7E-13
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1155 1281 1.6E-26
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1159 1272 2.75E-24
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 1793 1929 6.54E-22
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1607 1793 7.9E-53
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1161 1252 1.0E-13
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1469 1608 7.6E-12
Coils Coil Coil - - 1932 1959 -
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1961 2072 1.0E-25
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1698 1712 1.3E-10
MobiDBLite mobidb-lite consensus disorder prediction - - 569 588 -
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 649 740 3.3E-11
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 870 966 1.8E-4
Coils Coil Coil - - 448 468 -
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1314 1400 7.8E-7
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 1038 2076 0.0
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1159 1257 3.39843E-13
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 872 1007 4.1E-21
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 647 771 1.2E-23
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1657 1793 1.4E-16
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 1799 1932 1.0E-19
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 870 992 1.31E-19
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1961 2077 8.97E-37
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 647 744 5.1E-6
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1961 2072 9.78428E-32
Coils Coil Coil - - 1167 1187 -
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1159 1256 1.7E-6
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1312 1403 2.93248E-6
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1653 1794 1.1E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.