Pseudomonas sp. PAMC 25886, MUM_RS0105040
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:PF03544
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.1150.10 | - | - | - | 103 | 292 | 1.3E-17 |
| Coils | Coil | Coil | - | - | 157 | 177 | - |
| Pfam | PF03544 | Gram-negative bacterial TonB protein C-terminal | IPR037682 | TonB, C-terminal | 213 | 290 | 2.6E-16 |
| SUPERFAMILY | SSF74653 | TolA/TonB C-terminal domain | - | - | 187 | 293 | 3.79E-19 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 67 | 163 | - |
| PANTHER | PTHR33446 | PROTEIN TONB-RELATED | - | - | 21 | 291 | 3.7E-21 |
| NCBIfam | TIGR01352 | JCVI: TonB family C-terminal domain | IPR006260 | TonB/TolA, C-terminal | 215 | 290 | 6.7E-14 |
| FunFam | G3DSA:3.30.1150.10:FF:000012 | Energy transducer TonB | - | - | 160 | 292 | 1.0E-38 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.