Pseudomonas sp. PAMC 26793, D109_RS0102035
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 26793 ctg7180000039285, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGAGCCGTGGCGCTCAACCTGCAGGACGGCTTCGCCTTGACCGCCGCCCTGGCCCATATGCGTGAGCGGATTGCTGCCTACGCGCCGGGTGTACCTTTCG ATCACCTGCTGTTGGAATCCATGGCCACGCCGCCGTTGGCCGAGCTGATTGTGGGCATCAAGCGCGAAAACGATTTCGGCCTGGCACTGGTGATCGGTGC GGGTGGAATCCTCGTGGAGTTGCTCAAGGACAGTCGCAGCCTGCTGCTGCCGACCACCGACGATGCGATCCGCAATGCCTTGCTCAGCCTGCGCAGCGCG GCATTGCTGCAAGGCTTTCGCGGGCGGGAAGTGGCCGACATGGAGGCGCTGGTGGCGGCGATTCGTGCGGTGGCCGACTACGCCTGCGCCAACGCCGGGC AGTTGCTGGAACTCGATGTAAACCCATTGCTGGTCAATGCCCGGGGCGCCACGGCGGTCGATGCATTGATCCGTCTCGCCCAGGTGTGAAGGAGATGACG
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| DNA Sequence for Gene |
>D109_RS0102035
ATGCAAAGCAAAACCTTGACGGGCGGCCAGGCCCTGGTGCGATTGCTGGCCAACTATGGCGTCGACACCGTATTCGGGATTCCCGGCGTGCACACGCTGG AGCTGTATCGCGGCTTGCCCGGCAGTGGCGTTCGGCATGTGCTGACTCGTCACGAGCAGGGCGCCGGCTTTATGGCCGACGGTTATGCGCGGGTCAGCGG TAAGCCAGGCGTGTGTTTCATCATCACCGGGCCGGGGGTGACCAACGCCGCCACGGCGATCGGCCAGGCGTATGCCGACTCGATTCCGCTGCTGGTGATT TCCAGCGTCAACCACACCGCCAGCCTCGGCAAGGGGTGGGGTTGCCTGCATGAAACCCAGGACCAACGGGCGATGACCGCGCCCATCACCGCGTTTTCGG CAGTGGCGTTGAGTGCCGAGGATTTGCCGGAATTGATCGCGCGGGCCTACGCGGTGTTCGACAGTGAGCGACCACGGCCGGTGCATATTTCGGTGCCGCT GGATGTGCTGTCAGCGCCGATCAAGCGCGACTGGAGCAATGACGTGGTGCGCCGTCCCGGGCGAGGTCTGCCATCGGCTGAAAGCCTCGATCAGGCCGTG GCAAAACTGGCGGCGGCCAAGCGTCCGATGATCATTGCCGGTGGCGGCGCACTGTTGGCGGCCGAGGCCTTGCAGCGCTTGAGCACACAACTGGCGGCGC CGTTTTTCAGCAGTGTCGCCGGTAAGGGGTTGTTGCCGGTGGAGCATCCGTTGAACGCCGGTTCGACCTTGTGCATCGAGCCCGGCTGGCAGCTGATCGC CGAGGCGGATGTGGTGTTGGCCATCGGCACCGAAATGGCCGATACGGATTTTTGGCGTGAGCGCCTGCCGATTAACGGCGAGCTGCTGCGAGTGGATATC GACCCGCGCAAGTTCAACGATTTCTATCCTTGCGCTGTCGCGTTGCACGGTGATGCCCGGCAAACGACGCTGGCTTTGCTGGAACGCTTGCCAGCCACGC CGCGCAACGCGGATGCCGCCACCGCTGCGGTCGCGACGTTACGCCAGGCAGTCAGCAGCGGCCATGGTCCGTTGCAACGGATTCACCAGGCGATTCTCGA CCGCGTCGCCGCCGAGTTGCCCACCAATGCCTTCATCAGCAGTGACATGACCCAACTGGCCTACACCGGTAACTACACCTTCCCCAGCAATGCCACCCGC AGTTGGCTGCATCCCACCGGCTACGGCACCTTGGGCTACGGCCTGCCGGCCGGTATCGGCGCCAAGTTCGGCGCGCCGGAGCGGCCCGGCCTGGTGCTGG TGGGCGACGGCGGCTTTCTCTACACCGCCCAGGAACTGGCCACAGCGGTGGAAGAACTGGACAGCCCGCTGGTGGTGTTGCTGTGGAACAACGACGCCCT GGGGCAGATTCGCGACGACATGCTGAACCTGGACATCGAACCCATCGGCGTACTGCCGCGCAACCCGGACTTCGCCGCCCTGGCGCGGGCGTTCGGCTGC ACGGTCAGCGAGCCGCAGAACCTGGATGAGCTGCAGACGGATTTGCGTAACGGTTTCAAGCGCAACGGCGTGACCTTGATCGAGTTGAAGCATGCCTGTG TGAACCTTTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGAGCAACACCATGAGCGAAAACAACAACAAAATGACTCAAGCGATGCACCGACGGGATTTCCTCAAACACAGCGCCGTAGCCGGTGCCGTGGCCGCCG CGTTTTCCATGGGCCTGCCGCTGCCGGCCTTCGCCGAAGAGGCCACGCCCAAGCCCGGCGGCGTGCTGCGCATGGGATTGGCCGGCGGCAGCACCACCGA CTCCCGCGACCCGGGATCCTGGGTCGACACCTTCACCTTCGTCGGCTTTTCGGCGGTGTACAACACCCTCACGGAAATCGCGGTGGACGGCAGCGCCATC CCCGAATTGGCCGAGAGCTTTGAGTCGACGCCCGACGCGCGCATCTGGACCTTCAAGCTGCGCCAGGGCGTGACCTTCCATAACGGCAAAAGCCTGACCG CTGACGATGTGGTGGCCTCGATCAACCATCACCTGGCAGCCAACTCCACGTCGGCGGCCAAAACGGTAATCGGCGATGTGGCCAGTGTCAGCGCCAAGGG
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| Amino Acid Sequence |
>decarboxylase
MQSKTLTGGQALVRLLANYGVDTVFGIPGVHTLELYRGLPGSGVRHVLTRHEQGAGFMADGYARVSGKPGVCFIITGPGVTNAATAIGQAYADSIPLLVI SSVNHTASLGKGWGCLHETQDQRAMTAPITAFSAVALSAEDLPELIARAYAVFDSERPRPVHISVPLDVLSAPIKRDWSNDVVRRPGRGLPSAESLDQAV AKLAAAKRPMIIAGGGALLAAEALQRLSTQLAAPFFSSVAGKGLLPVEHPLNAGSTLCIEPGWQLIAEADVVLAIGTEMADTDFWRERLPINGELLRVDI DPRKFNDFYPCAVALHGDARQTTLALLERLPATPRNADAATAAVATLRQAVSSGHGPLQRIHQAILDRVAAELPTNAFISSDMTQLAYTGNYTFPSNATR SWLHPTGYGTLGYGLPAGIGAKFGAPERPGLVLVGDGGFLYTAQELATAVEELDSPLVVLLWNNDALGQIRDDMLNLDIEPIGVLPRNPDFAALARAFGC TVSEPQNLDELQTDLRNGFKRNGVTLIELKHACVNL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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