Pseudomonas aeruginosa PADK2_CF510, CF510_30897
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PADK2_CF510 contig070, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGGATAGATGTCGCTGGTCAGGCGTTCCTCGTAGCCGTGCAACTGGTCGGGACCGCAGAAGTGCATCTTGCCCGACAGCGCCGTGCGATAGCCGAGGTT GCGCAGGTAGTGGGCGTAGGTGGGGGTATCGGCGGCGAAGTCGGCGGCGTTGTCCCAGGCGCCGATGCGGGTAGGCAAGCGACCGCTGACCAGGGTGAAG CGCGACGGCGCGCAGAGCGGGCTGTTGCAGTACGCCGAGTCGAACACCACGGCCCGTTCGGCGAGGCGCGAGAGGTGAGGCATGCGCAGCACCGAGCGCG GATCGTGAAGCGGCAGCAGCGGCGCGGCCATCTGGTCGGCCATGATGAACAGGATGTTCGGCGAGGTCTTCATCGGGCGGCTTATCCCATGCGATTGGGT TATGCGATAGTGCTGCGTCGATCATCAGTGCATCGAAATCCCTGGTAAACCGCATGGGGCTGGATGCGTTGGATAAGCCTGGCTTATGGGAGAACGCCTC
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| DNA Sequence for Gene |
>CF510_30897
ATGCCGCTGTGCCTCGACCTGCTCCGGGTATTCGAGTCCGCCGCCCGCCAGCTCAGCTTCACCGCTGCCGCCGAGGAGCTGGGGACCACCCAGCCTGCGG TCAGCCAGCAGATCAAACGCCTGGAGAAGGAGCTGGCGACCCCTCTGTTCCAGCGCGTCCATCGAGGCATCGTGCTCACCGACGCCGGCCAGCTCCTGCT CCGCCACGTGGCCGCCGGCCTCGAGACGATCGATGCCGGCATCGCCGCGCTGGGCGCGCGCCAGCGCCACGAGGTGCTCCAGGTGGCCACCGACTACGCC TTCGCCGCCTACTGGCTGATGCCGCGCCTTCCGCGCTTCCACCAGGCCCATCCGCATCTGGACGTGAGCCTGGTGACCAGCGAGCGCGGCCTGGCCGGCC AGCGCGGCGATATCGACGTGGCGATCCTGTTCGGCGACGGTCGTTCCAAGCACGGCGAAGCGCACCGGCTGTTTCGCGAGGAGGTGTTCCCGGTCTGTAG CCCGCGCCTGGTCGAGGGATTGCAGTTGCCGCTGGCCAAGGTGCACCTGGCGCGCCTGCCGATGCTGCATCTGAAGCCGGCGCAGCACGCCCGCTGGTTC GACTGGCCGGCGTTGTTCGAAGCGTTGGCCATCGATCGGCAGCCGATTCCGGCGGTGCTCAGCTTCGACAACTACACCTTGCTGATCCAGGCGGCCATCG CCGGCCAGGGCGTGGCCATCGGCTGGCGCCACCTGGTCGACGGCCTGCTCGAACAGGGGCTGCTTTGCCGGCCCATTGGCGAGAGCTGCCTGTCGCGATA CGGGTACTATGCGGTATTGCCGGAGCGCAAGCGGCGCCAGCGGCTGGTCGACGGTTTCGTCGACTGGCTGCAGGCCGAGTTGCAGGCCGGCGGCGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGAGGTGACGATGAACGAGTATTCCACCCCCCGCATCCAGGGCTTCCATGCTCACGTCTATTTCGATGCGCAGAGCATCGAGCGAGCCCGCGCCCTTTGC GAAGAGGCGGCGCGGCGCTTTCCGCTGAAGATGGGGCGGGTCCATGAGCGGCCGGTAGGGCCGCATCCGGACTGGAGCTGCCAGCTGGCATTCGCTCCCG AGGTGTTCGGCGAGCTGGTGCCCTGGCTGGCCATCCATCGGCAGGACCTGGTGGTGTTCATCCACCCGGTCACCGGCAACGATCTGCTCGACCATCGCGA CCGAGCCATCTGGATGGGAGCCATTCGCCCGCTGGACCTGTCGATCCTGGACGAAGGCCCGCAACGCTATGACTTCGCCGTGCCTTGAGGCGCGGTCATC GTCATCCAGTCGTGCAGTTCGCATTGCAGCTCGCCCAGTGCCGTCACCAGGTCGTCGACGGCATCGGCGAGCTTGCGCACGGAGCTTTCGCCGCAGGCGA
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MPLCLDLLRVFESAARQLSFTAAAEELGTTQPAVSQQIKRLEKELATPLFQRVHRGIVLTDAGQLLLRHVAAGLETIDAGIAALGARQRHEVLQVATDYA FAAYWLMPRLPRFHQAHPHLDVSLVTSERGLAGQRGDIDVAILFGDGRSKHGEAHRLFREEVFPVCSPRLVEGLQLPLAKVHLARLPMLHLKPAQHARWF DWPALFEALAIDRQPIPAVLSFDNYTLLIQAAIAGQGVAIGWRHLVDGLLEQGLLCRPIGESCLSRYGYYAVLPERKRRQRLVDGFVDWLQAELQAGGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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