Pseudomonas stutzeri B1SMN1, B382_24278
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri B1SMN1 contig00030, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGGGGTCGTGGGTTCGAATCCCGCCGGATGCGCCATATTAGATACTCGTTTCGAGCCCCTTCGAAGCGCTCCGCAAAAGCCCGCTCGCTGCGGGCTTTT GCGTTTCTGCAGGTCCGTCCGCCTGACCGGATCGCCTGCCAGCAAACGGCCGGTCGGCGCAAGTTGAACCCGCCGCGCGGCATCACCGGGCCGCCTCAAC CTGACCTCACGCTCGTTTTAGACGCATCCGTCGGGCGTTCTGTGAACCTGTTCACCGAGCCTGCGGGACAACTGAACTTCAATGCCTCGCTCAGGTCGCG CCATGCGCACCTTGCCCCCACACACGACTTCAAGGAGGAAATCGCGTGCCAGTGCGCTATTACGCCCTCGTTTCGCTCATCGCCGCCGTGCTGCTCGCCG GTTGCACCGGCAACTACAAATTCGACGATGACCACTATCGCCCGCTGGGTGATCCGCAAGCCTTGAATCGCGGCCAGTAACCGCAAGGAGCGACACGACC
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| DNA Sequence for Gene |
>B382_24278
ATGGAACTGGTCTTCGATATGGTGGGCGCCCAGCAATTCGTGCCGGGTCTGTTGACCACCAAAACCTTCAAGCAGGCCGGCGGTGTGATCGGCCGCGCAG AGGGCTGCGATTGGGTGATCCCCGACCGCAAGCGCGTCCTCTCCGGCCGTCACGCAGTGATCAGCTACCGCGACGGCGCCTTCTTTCTCACCGATACCAG CAGCAACGGCATCCAGCTCAAGGACAGCGGCGCCAGCCTGGTCAAAGGCCAGCCGCAACGCATCGAGCATGGCAGCGTCTACTGCCTGGGCGATTTCGAG ATCCGCGCCCGGCTGATCCAGGACCCGGCGCTGTTCGAAGGTGACATCGGTCGTCCGCAGCCGGCTGGCAGCATCATCCCCGACGACGCCTTCCTCGACC TCGATCCGCTGGTTGCCATGGATCAGCAGGAGCGCGTCTATGCCGAGGTCGACGACCTTGACCTCGCTCTGGTAGCGCCACAGCGCCAGGCGCAGCAGCA GCGCGACTACGCGCGCATCGACATGGAAAGCCTGCCGTTGCCGGAGCTGGTCATGCCGCAGGCAGCACCGCAAGCCAAGCGCGAAGCCGAGCCCGAACGA CTGCCGCAGGGATTCTGGGCGCGTTTCGGCGAGGCGCTGGGCATCGATCTCGACGATCTCGACGAGGACCAGCGCCAGGCCTTGGCGCTGAATGCCGCCC GCCTGCTCAAGCAGAGCGTCGGTGGCTTGCAGCAGAGCCTGCGCACCCGCAGCGAGCTGAAGAACGAGCTGCGCCTGGCGCTGACCACCGTGCAGAGCGC CGGCAACAACCCGCTCAAGCACAGCGCTGATACGGGTGAGGCCCTGAGCGCCCTGCTGCGCGGTGGCAAGCCAGGCCAACTCTCGGCCGAACAGGCCATC GGTCGCGCCTTCCGCGACCTGCAGGCGCATCAGGTGGCACTGCTGGCGGCCAGTCGCGCGGCGGTGCAGGCGATGTTCGAGCAGCTGGCACCAGAGCAGC TGGCGCTGCGTTTCGAACGCGAAGGCCGCAAACCGCTGATCGCTACTGCCGGCAGCCGCTGGCGCGCCTATCGGCGGCTACATCACAGCCTCGGCCAGGA TGCCGACTGGAGCGAGCGACTGTTCGCTCGCAACTTCGCCAAGACCTATGAGGAGCAGGTGCGCCTGATCGCCACGCTCGATTCAACCCATCAAGGATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCCATGCCTCGTCGCATCACCCTGGCCATGCTGGCCTCGCTGCTCTTGCTGGGCGGCTGCTCGGCGCTGTCGCCGTACTCCAAGCTGACCAAGCTCGAC CTCGAACTGCACGGCAGCGACCGCCTCAACCCCGATCTCAACGGCCGGCCGTCGCCGATCGTGCTGCGCCTGCTGGAGCTCAAGCATCCGGTGGCGTTCG AGAATGGCGACTTCTTCGCCCTCTACCAGCGGCCCAAGGAAGCCCTGGCGCCGGACCTGGTGACCTCCGAGGAACTGGAACTGCGTCCCGGCGAAAGCCG TGAGCTGAAGCTCTCGGTGCAGGACGGCAGCCGCTACGTCGGCGTGCTGGCCGCCTACCGCGACCTGCCGGAAGCCAGCTGGCGCTACGTCATCGCCTTG CCGCCGCAGGAGCGCACCCGCATCGCCCTGAGCCTGGATGAGCGTGGCATCGCGCTGTTCGACCCGCTCGCCGAAGAAGGAAAATAAGCATGAGCCTGCA
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| Amino Acid Sequence |
>FHA domain-containing protein
MELVFDMVGAQQFVPGLLTTKTFKQAGGVIGRAEGCDWVIPDRKRVLSGRHAVISYRDGAFFLTDTSSNGIQLKDSGASLVKGQPQRIEHGSVYCLGDFE IRARLIQDPALFEGDIGRPQPAGSIIPDDAFLDLDPLVAMDQQERVYAEVDDLDLALVAPQRQAQQQRDYARIDMESLPLPELVMPQAAPQAKREAEPER LPQGFWARFGEALGIDLDDLDEDQRQALALNAARLLKQSVGGLQQSLRTRSELKNELRLALTTVQSAGNNPLKHSADTGEALSALLRGGKPGQLSAEQAI GRAFRDLQAHQVALLAASRAAVQAMFEQLAPEQLALRFEREGRKPLIATAGSRWRAYRRLHHSLGQDADWSERLFARNFAKTYEEQVRLIATLDSTHQG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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