Pseudomonas stutzeri B1SMN1, B382_15993

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri B1SMN1 contig00010, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCTGGGACTGCGGGAACTCGCGCATCTTCAGCACGTACTCGAAGGGATTGCCGTCGCCGCCGATCACCGGAGCATCAGGCGAGCCGGTGACAGGCAACA CTTCCAGGTAGAGGTCAGGTGCCATGCGCTGGTTGAGGCGCAGCTCTTCTTCGCAGAAATGCTTGCGCGAGGCCAGATCGGTGAAGTTGAGGAAGCCGAA GTCCACCGGCTTCTTGATCTTGTAGGCGTACTGGCCGGTGAGGATCACCCAGGAAATATGGGTTTCGATGACCCGAAAGCTTTCGGTGGGGTGCGGATAC AGGGCAGGATTCTGCAGGGCGGCGATCAGTGCTTGGCTCACGGTCATTCCTTGTCGAAGTTCTTGAACGGGGCGTGCGAGTCCACTGCGAAGCAGTCCAC ACAGTCGTAAAGTCGCCGGCATTATGGCCGCTGAGCGTTGCGCTGCAAACCGCTGAGAGGCCGTCAATCCGCTGCGGCAAAGTGCGTATAATGCGCCGCC
DNA Sequence for Gene
>B382_15993
ATGACTAAACCTCGCTCCCCCCGAAATCGCTCCAAGCGCCGCTCCAGTGGTGCTCGCCCCTGGTTGGGCTGGGCGGTCAAGCTCTCCATTGTCGGCCTGG TGATCCTGGCCGGTTTCGCCATCTATCTCGATGCTGTCGTGCAGGAGAAATTCTCCGGCAAGCGCTGGACGATTCCGGCAAAGGTCTATGCGCGGCCGCT GGAACTGTTCGTCGGTCAGAAGCTGGACAAGAACGATTTCCTTGCCGAGCTGGACGCTCTTGGCTATCGGCGCGAGCGCTCGGTCAGCGGCCCGGGCGGC GCTTCGGTTGCCGGCAACGACATCGAACTGCATACCCGCGGCTTCCAGTTCTACGAAGGCGCCGAGCAGTCGCAACGGTTGCGGGTCCGCTTCTCCGGCG ATTTCGTTGCTGGCCTCAGCAGCGCCAACGGGAGCGCTCTGCCTGTGGCGCGTCTGGAGCCCGTGCTGATTGGTGGGTTGTATCCCGCGCACAACGAGGA TCGCATCCTGATCAAGCTGGATCAGGTGCCGCCGTATCTGGTGGAAACGCTGGTTGCGGTCGAGGATCGGGAATTCTTCAATCACTTCGGTGTGTCGCCC AAATCCATCGCCCGCGCGGTCTGGGTCAACCTGACTGCCGGCCAGGTTCGCCAGGGTGGCAGTACCCTGACCCAGCAGTTGGTCAAGAACTTCTACCTGA CCAACGAGCGCAGCATGACCCGCAAGATCACCGAAGCGATGATGGCGGTGCTGCTTGAGCTGCATTACGACAAACAGGAAATTCTCGAGGCTTATCTGAA CGAGGTGTTTCTCGGTCAGGATGGTCGTCGCGCGGTGCACGGGTTCGGCCTGGCCAGTCAGTACTTCTTCGGTCAGCCGCTGGCCGAGCTGAAGCTGCCG CAGGTGGCGTTGCTGGTCGGCATGGTCAAGGGGCCAACCTATTACAACCCGCGGCGCAATCCCGAGCGTGCCCTGGAAAGGCGCAATCTGGTGCTCGATC TTTTGGCCGAGCAGCAGGTCATCAGCGCCGATGAGGCGGCCAAGGCCAAGCAGGCGCCACTGGGGGTAACCCAGCGCGGCAGCATGGCGGACAGTTCCTA TCCGGCCTTCCTCGACCTGGTCAAGCGCCAGCTGCGAGAGGACTATCGGGACGAGGACCTTACCGAAGAAGGCCTGCGCGTCTTCACCAGCTTCGATCCG GTGCTTCAGCTGAAGGCCGAGCAGGCCATGAGCGAAACCCTCAAGCGACTCGGCAAGGCCACCGAGGGCGTCGAGGGCGCGATGATCGTCACCAATCCGG AAACCGGTGAGATCCAGGCCATGCTGGGCAGCCGCCAGCCAGGGTTTGCCGGCTTCAATCGGGCACTGGATGCCTCACGACCGATCGGTTCGCTGATCAA GCCGGCCATCTACTTGGCCGCACTGGAGAAGCCCAGCCAGTACACGCTGACCAGTCTGCTCGAGGATGAGCCCTTCTCCGTGAAAGGTGCCGATGGGCAG GTCTGGAAGCCGCAGAATTATGGGCGTCAGGCCTATGGAACGGTGTATCTGTATCAGGCGCTCGCCAATTCCTACAACCTGTCGACCGCGCGGCTCGGGC TCGATCTGGGCGTGCCGAACGTGCTGAAGACGCTCGAGCGCCTGGGTGCATCGCCCAAATGGCCGGCTTACCCATCGATGCTGCTGGGGGCCGGTAGCCT GCGTCCGATCGAAGTGGCCGACATGTATCAGACGCTTGCCAACGGTGGCTTCAATACCCCGCTGCGGGGCATTCGCAGCGTGTTGACCGCCGACGGCGAG CCGCTCAAGCGTTATCCGTTCCAGATTCAGCAGCGCTTCGATCCGGGGGCCATCTACCTTACCCAGTACGCCTTGCAGCGCGCCATGCGCGAGGGTACCG GGCGCTCGGCGTACAACCGACTGCCGCAGTCGCTCAATCTGGCCGGCAAGACCGGCACCACCAACGATTCGCGTGACAGCTGGTTCGCCGGCTTCAGCCA GGATCTTCTGGCAGTGGTCTGGCTGGGGCGCGACGACAACGGCAAGACGTCTCTGACCGGTGCCACCGGGGCACTGCAGGTATGGACCGACTTCATGCGA CGGGCCGACCCGCTGCCGTTGCAGATGCCGGTTCCGGACAATGTCACCTACGCCTGGATCGATGCCCGTAGCGGACTGGGTACCGACGAACGCTGCCCGG ATGCCGTGCAGATGCCCTATATTCGCGGCAGCGAACCGGCGCCGGGGCCAGGCTGCGGCATACAGGCCCCCGCAGAGCCGCTCATGGATTGGGTGCGTGG CTGGTTGCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGGTGCAGCCGACGTGTCTTCCGTGCTTTTTTATGAAGAGGTCAGAAAGTGAATAAGCAGTGGATAGCTGTTGTAGCAGCAGTGGTTCTGATCCAGGGCT GCGCGACGGTGGACCGTCATTCGATACCTGTCGTCGACGCCGGCGCGCCTGTTTCCGAGGAAATGGCCGCGCGGCAGGCCTATCGCGCGCCCGCTGTCAT GGCCCCGGCCCAGATGCCACGACAGCAGCAGGAAGATTCCGGTGTCGTGGTGATGGTGCCGGAGGGATCATCGGCACCCCTTGAAACCTTCGCGGCGCCG GACGTGCCTTTTTCTTCTTCCAGTGATGCCGCCGGCGGTTCGCAGCCAGCCTGGCAGCCCGTGCCATCGATCTCCGCACCGCCCAGCACGCCACAGCCAA GCATGCCCAGTGGCATTCCTGCCTCAGGTAGCGGTCTGGCGGCTGACGAGCAGCTTGATGGCCCGGTCCTGGCGTTACTCACCACCGCGCAGCAGCAGCA
Amino Acid Sequence
>penicillin-binding protein 1B
MTKPRSPRNRSKRRSSGARPWLGWAVKLSIVGLVILAGFAIYLDAVVQEKFSGKRWTIPAKVYARPLELFVGQKLDKNDFLAELDALGYRRERSVSGPGG ASVAGNDIELHTRGFQFYEGAEQSQRLRVRFSGDFVAGLSSANGSALPVARLEPVLIGGLYPAHNEDRILIKLDQVPPYLVETLVAVEDREFFNHFGVSP KSIARAVWVNLTAGQVRQGGSTLTQQLVKNFYLTNERSMTRKITEAMMAVLLELHYDKQEILEAYLNEVFLGQDGRRAVHGFGLASQYFFGQPLAELKLP QVALLVGMVKGPTYYNPRRNPERALERRNLVLDLLAEQQVISADEAAKAKQAPLGVTQRGSMADSSYPAFLDLVKRQLREDYRDEDLTEEGLRVFTSFDP VLQLKAEQAMSETLKRLGKATEGVEGAMIVTNPETGEIQAMLGSRQPGFAGFNRALDASRPIGSLIKPAIYLAALEKPSQYTLTSLLEDEPFSVKGADGQ VWKPQNYGRQAYGTVYLYQALANSYNLSTARLGLDLGVPNVLKTLERLGASPKWPAYPSMLLGAGSLRPIEVADMYQTLANGGFNTPLRGIRSVLTADGE PLKRYPFQIQQRFDPGAIYLTQYALQRAMREGTGRSAYNRLPQSLNLAGKTGTTNDSRDSWFAGFSQDLLAVVWLGRDDNGKTSLTGATGALQVWTDFMR RADPLPLQMPVPDNVTYAWIDARSGLGTDERCPDAVQMPYIRGSEPAPGPGCGIQAPAEPLMDWVRGWLQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site