Strain | Pseudomonas stutzeri NF13 contig00032, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCCCGCGAGCTGTATGCCATGGGCTGCTACGAGGTTTCCCTGGGCGACACCATCGGCACCGGCACACCGGGCAAGACCCGCACGTTGTTCGATACCGTA GCCCGCGAAGTGCCGCGCGAACGGTTGGCCGGGCATTTCCACGACACCTACGGCCAGGCGCTGGCGAATATCTATGCGAGCCTCTTGGAAGGCATCGCCG TGTTCGACAGCTCGGTCGCCGGCCTCGGCGGTTGCCCTTACGCCAAAGGCGCCAGCGGCAATGTCGCCAGCGAAGACGTGCTGTACATGTTCAACGGGCT GGACATAGCCACCGGCATCGACCTCGACGCACTGATCGCCGCCGGCCAGCGCATCAGCCAGCTGCTGGGGCGCGCCAACGGTTCGCGGGTCGCCCGCGCC AGACTGGCCGGTTAGCGGCACCGTTCTTGCTAAACCCTATTCGTCGGGCGCCTGCTCAGATGGCACCCGGCACGGACAGAACAACAAGTAGAGGTAATTC
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DNA Sequence for Gene |
>B381_05101
ATGAACAAGATTTACCCCAGCGCCGCCCACGCCCTGGAAGGCCTGGTCGAGGACGGCATGACCATCGCCGTCGGCGGCTTCGGCCTGTGCGGCATCCCCG AGCAGCTGATCGGCGCGCTGCGCGACAGCGGCAAGAAGAACCTGACTGCCATCAGCAACAACGCCGGTGTCGACGGTTTCGGCCTCGGCCTGCTGCTGGA GACGCGGCAGATCAGCAAGATGATTTCCTCCTACGTGGGTGAGAACAAGGAGTTCGAGCGCCAGTACCTGGCCGGCGAGCTGGCCCTGGAGTTCACCCCG CAGGGCACCCTGGCCGAGAAGCTGCGTGCCGGCGGCGCGGGCATCCCGGCGTTCTACACCAGGACCGGCTACGGCACGCTGGTGGCCGAAGGCAAGGAAA CCCGCCAGTTCAACGGCGAGTGGTACGTGATGGAGGAATCGCTGACCGCCGACCTGGCGCTGGTCAAGGCATGGAAGGCCGACAAGGCCGGCAACCTGCT GTTTCGCAAGACCGCGCGCAACTTCAACCCGCTGGCGGCGATGGCCGGCGAGGTCTGCGTCGTCGAGGTGGAGGAGATCGTCGAGACCGGCGAGCTGGAC CCGGACCAGATCCACCTGCCGGGCATCTACGTGCATCGCATCGTGCACAACCCGAACCCGGAAAAACGCATCGAAAAACGCACGGTGAGGAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GACCATGGCCTGGACACGTGAACAGATGGCGCAACGCGCCGCCCAGGAGCTGCAGGACGGCTTCTACGTCAACCTCGGCATCGGCCTCCCGACCCTGGTG GCCAACTACATCCCCGACGGCATGGACGTCTGGCTGCAGAGCGAGAACGGCCTGCTCGGCATCGGCCCCTTCCCGACCGAGGAAGAGATCGACCCGGACC TGATCAACGCCGGCAAGCAGACCGTCACCGCCCTGCCCGGCTCGAGCTTCTTCGACAACGCGCAGAGCTTCGCCATGATCCGCGGCGGCCACATCAACCT GGCCATCCTCGGCGCCATGCAGGTGTCGGAAAAGGGCGACCTGGCCAACTGGATGATCCCCGGCAAGATGGTCAAGGGCATGGGCGGCGCGATGGATCTG GTGGCTGGCGTCAAGCGCGTCGTGGTGCTGATGGAGCACACCGCCAAGGGCGGCGCGCACAAGATCCTGCCGGCCTGCGACCTGCCACTGACCGGCCTCG
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Amino Acid Sequence |
>CoA transferase subunit A
MNKIYPSAAHALEGLVEDGMTIAVGGFGLCGIPEQLIGALRDSGKKNLTAISNNAGVDGFGLGLLLETRQISKMISSYVGENKEFERQYLAGELALEFTP QGTLAEKLRAGGAGIPAFYTRTGYGTLVAEGKETRQFNGEWYVMEESLTADLALVKAWKADKAGNLLFRKTARNFNPLAAMAGEVCVVEVEEIVETGELD PDQIHLPGIYVHRIVHNPNPEKRIEKRTVRS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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