Pseudomonas stutzeri NF13, B381_01525
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri NF13 contig00011, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAGCAGATGGTGCGCGACGCCGAGGCGAATGCCGAGGAAGACCGCAAGTTCGAGGAGCTGGCCACTGCACGTAACCAGGGCGACCAGTTGGTGCACGCCA CCCGCAAGATGCTCACCGAAGCCGGCGACAAGGCCAGCGACGACGACAAGGCTGCCATCGAGAAGGCGCTTGGCGAGCTGGAAGTGGCCATCAAGGGCGA CGACAAGGCCGAAATCGAAGCGAAGATCGCAGCGGTTTCCCAGGCTTCCACCCCGGTCGCGCAGAAGATGTACGCCGAGCAGGCTCAGGCTGGCGAAGGC CAGCCGGCAGATGAGCAGGGCAAGCCGGGTGACGACGTGGTCGACGCCGAGTTCGAAGAGGTCAAGGACAACAAGTAAGCCCTGGCTTGCTTCCGCTCCA GCCCGTCCCGACATCGTTCGGGCGGGCCCGACCGCTGCGCGGGGGCTTGCTCCCGCGTCGGCGTGTCTGGAAGGCATGAAATTGAGGGTTCAGGATAGTT
|
|
| DNA Sequence for Gene |
>B381_01525
ATGGCCAAACGCGATTTTTATGAGGTGCTGGGCGTCGAGCGCGGCGTCAGCGAGGCGGAGCTGAAAAAAGCTTACCGGCGCCTTGCGATGAAGCATCACC CGGACCGCAATCCGGGAGACAAGGTGGCTGAGGACGCCTTCAAGGAGGCCAACGAGGCCTACGAAGTACTCTCCGATCCGAGCAAGCGTGCTGCCTACGA TCAGTACGGGCATGCCGGTGTCGATCCGCAGATGGGCGCTGGGGCGGCCGGTGCTGGCTACGGCGGCGCGAACTTCTCCGATATTTTCGGCGACGTTTTC AGCGATTTCTTCAGCGGTGGCCGCGGCGGCGGACGTGGCGGTGCGCAGCGCGGCAGCGATCTGCGTTACACGCTCGAGCTCGATCTCGAAGAGGCTGTGC GCGGCACTACGGTGACCATTCGCGTGCCGACCCTGGTCGAGTGCAAGACATGCGATGGCTCCGGCGCGAAGAAGGGTACGAGCCCTGTCACCTGTACCAC CTGCGGTGGTATCGGTCAGGTGCGCATGCAGCAGGGCTTTTTCTCGGTGCAGCAGACCTGCCCGCGCTGTCATGGCAGCGGCAAGATGATTTCCGATCCG TGCGGCAGCTGCCATGGCCAGGGCCGCGTCGAAGAGCAGAAAACGCTCTCGGTCAAGGTGCCACCGGGTGTCGATACCGGAGACCGCATCCGTCTGTCCG GCGAAGGCGAGGCGGGTACGCAGGGTGGTCCGGCCGGCGATCTGTATGTCGTGGTCAATGTGCGTGAGCACGCGATCTTCCAGCGCGATGGCAAGCATCT GTATTGCGAAGTGCCGATCAGCTTTGCCGATGCGGCACTGGGCGGCGAGCTGGAAGTGCCGACGCTGGATGGTCGCGTCAAGCTGAAGATTCCAGAGGGT ACGCAGACCGGCAAGCAGTTCCGCCTGCGCGGCAAGGGTGTTGCGCCGGTGCGTGGTGGTGCGGCGGGCGATCTGATGTGTCGTGTGGTGGTCGAAACTC CGGTCAATCTGAGCAAGCGCCAGCGCGAGATGCTCGAGGAGTTCCGCGGTACGCTGCAGGGCGATACCTCGCATTCCCCCAAGGCCAGTGGCTGGTTCGA AGGTGTGAAGCGCTTTTTCGGTGATGTTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACGAAGCTACAAGCCGCAAGCTTCAGGCCGCAAGAGGGTGTTGCGCTTGGCTTGCCGCTTGAGGCTTGCAGCTTGGAGCTGACTTTTTATGCGACGTATT GCAGTGACCGGCGCCGCCGGACGCATGGGCAAGACCCTGATTGAGGCGGTGCAGCAGACCAGCGGTGTCGCTGGTCTGACGGCAGCCATCGATCGGCCGG ACAGTACTCTCGTCGGCGCTGATGCCGGCGAGCTCGCGGCCATCGGTCGTCTGGGCGTGCCGCTGACCGGTGAGCTCGCCCGGGCCGTCGACGAGTTCGA CGTGCTGATCGATTTCACCCACCCCTTGGTGACTCTGAAGAATCTGGAAGTCTGCCGGCGTGCCGGCAAGGCGATGGTGATCGGTACCACCGGATTCTCG CTGGAAGAGAAGGAGCGTCTCGCAGCCGCGGCCAAGGAGATCCCGATCGTCTTTGCCGCCAACTTCAGCGTTGGCGTCAATCTCTGCCTCAAACTGCTGG
|
|
| Amino Acid Sequence |
>chaperone protein DnaJ
MAKRDFYEVLGVERGVSEAELKKAYRRLAMKHHPDRNPGDKVAEDAFKEANEAYEVLSDPSKRAAYDQYGHAGVDPQMGAGAAGAGYGGANFSDIFGDVF SDFFSGGRGGGRGGAQRGSDLRYTLELDLEEAVRGTTVTIRVPTLVECKTCDGSGAKKGTSPVTCTTCGGIGQVRMQQGFFSVQQTCPRCHGSGKMISDP CGSCHGQGRVEEQKTLSVKVPPGVDTGDRIRLSGEGEAGTQGGPAGDLYVVVNVREHAIFQRDGKHLYCEVPISFADAALGGELEVPTLDGRVKLKIPEG TQTGKQFRLRGKGVAPVRGGAAGDLMCRVVVETPVNLSKRQREMLEEFRGTLQGDTSHSPKASGWFEGVKRFFGDV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|