Pseudomonas stutzeri MF28, L686_11760
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri MF28 contig18, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCTGTCGGCCAACCCGCTGCCGGTCATGCTCGCGGTGATGAAATGACCCGACGCCAGGCTCTCCGGCGAGCCCGCAGGCCTACGCCAGGGCATTCGCCG AAGACGAAGCCGGGCTTGTTCAATGATGAATTTCAGCGGCCGGCAACGCCGAGTAGAGTCTCCCGCGATGCGTCGATGGGAACGATGAAGGGAGCCGACC AGCAGCCGGTGCGATTTGCCGCTGCGGTCTTCGGCGGTGACCGGCGAACATGGCAAACCTGCGTGCCAGACGGGCTGGCTGAGAAATATTCGTCAGTATT TTGCCATCATGCGGGTAAACTTCCGCGTTACGGGTGGCAGCGCCTTCTGCGTTTGGCACAAGCCTTGCTCTCCCTAATACGATGAACCGGTGGCACGAGC CGGGCGCATGTTGCTCATGACGCCTAGACTTGTCTTGCTGGTTACAGCCGAGCCCGTCGCTGCATGCGCTGGCTCACTTCACAACAAGAGGAAAACAACA
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| DNA Sequence for Gene |
>L686_11760
ATGTTCAAACTGACCGCCACCGCGCTCGCCTGCGCCCTGTCCCTAGGCATGGCCACGCTGGCTCAGGCCGCAGACCCGATCATCATCAAGTTCTCCCACG TCGTCGCCGACAGCACGCCGAAGGGCCAGGGCGCACTGATGTTCAAGAAACTGGTCGAGGAGCGTCTGCCCGGCAAGGTCGAGGTGCAGGTCTACCCGAA CTCCTCGCTGTTCGGTGACGGCAAGGAAATGGAAGCGCTGCTGCTGGGCGACGTCCAGCTGATCGCGCCTTCGCTGGCCAAGTTCGAGCAGTACACCAAG CAGCTTCAGGTATTCGACCTGCCGTTCCTGTTCGACGACATGGCCGCGGTCGACCGCTTCCAGAAGAGCGACAAGGGCCAGGCTCTGCTGACCTCCATGG TCGACAAGAACATCACCGGTCTGGCGTACTGGCACAACGGCCTCAAGCAGCTGTCGGCCAACAAGGAGCTGCGCGAGCCGAAGGATGCGCGTGGCCTGAA GTTCCGCGTACAGGCGTCCCAGGTGCTCGAGGAGCAGTTCAAGGCCGTGCGCGCCAACCCGCGCAAGATGAGCTTCGCCGAGGTCTACCAAGGCCTGCAG ACAGGTGTCGTCAACGGTGCCGAGAACCCCTACTCGAACATCTACTCGCAGAAGATGCACGAGGTTCAGAAGCACATCACCGAGTCCAACCATGGCTTGC TGGACTACATGCTGATCACCAACACCAAGTTCTGGAACGGTCTGCCGGACGACGTGCGCTCGGAACTGAACGAGATCATCGGCGAGGTGACCGTCGAGGT GAACAAGCAGGCTGATGACCTGAACAAGCAGGCCAAGCAGCAGATCCTCGATGCCGGTACGACTGAAATTCTGGTCCTGAGCCCGGAAGAGCGTGCCAAG TGGCGTGAAGCCATGCAGCCGGTCTGGAAGAAGTTCGAAGGCGAGATCGGCGCTGACCTGATCAAGGCCGCCGACGCCTCCAATAAGGCCGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGTTACCGGAGGGCGGCCACCCGCCCTCCACCCCCGTTGCGGTACTGACAGCGCACCGGAGACACGCGACAAACCGGCGCAACGACGGATCGATCTCCG CCGCTACGCCACTACAACAAGCGTGTTCTGATCCTGTCGCCCGGTTACCAGACCGGCTTATGGCGCACAGTGCGTACGCCCATCGAATCCAATGCATTTC ATCGGGAGATGTCATCCATGAACGCCCTCTGGCGCGTCTGGGACCACTTCGAGGAAGGCTTTATCGCTTTCCTGCTGGCCGCCATGACTCTGGTGACCTT TGTTTATGTGGTCTTGAACAACCTCTACACCGTTTTCTATTCGCTGGGGGATACCTTTCCCGCTGCGGAAGACTTCTTCTTTGCCCTCGGCGATTTCATC ATCGGCCTGGCGCAGTCCATGACCTGGAGCTCGGCGCTCACCCGGGCACTGTTCGCCTGGCTGATCTTCTCCGGCCTGGCCTATGGCGTGCGCACCGCTG
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| Amino Acid Sequence |
>C4-dicarboxylate ABC transporter
MFKLTATALACALSLGMATLAQAADPIIIKFSHVVADSTPKGQGALMFKKLVEERLPGKVEVQVYPNSSLFGDGKEMEALLLGDVQLIAPSLAKFEQYTK QLQVFDLPFLFDDMAAVDRFQKSDKGQALLTSMVDKNITGLAYWHNGLKQLSANKELREPKDARGLKFRVQASQVLEEQFKAVRANPRKMSFAEVYQGLQ TGVVNGAENPYSNIYSQKMHEVQKHITESNHGLLDYMLITNTKFWNGLPDDVRSELNEIIGEVTVEVNKQADDLNKQAKQQILDAGTTEILVLSPEERAK WREAMQPVWKKFEGEIGADLIKAADASNKAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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