Pseudomonas plecoglossicida NB2011, L321_17792

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas putida NB2011 genomic scaffold PT1_scaffold80, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCAGCTGAACGTGATGGAGCCGCTGATCGCCTACAAGATCTTCGACTCGATCCGCCTGCTGCAACGCGCCATGGACATGCTGCGCGAGCACTGCATCGT CGGCATCACCGCCAACGAACAGCGCTGCCGTGAACTGGTCGAGCACTCGATCGGCCTGGTCACCGCCCTGAACCCGTACATCGGCTACGAAAATGCCACC CGTATCGCCCGCGTCGCCCTGGAAACCGGCCGCGGCGTGCTGGAACTGGTGCGCGAAGAGAAGCTGCTGGACGAAGCGATGCTCAACGACATCCTGCGTC CGGAAAACATGATCGCTCCCCGTCTGGTTCCGCTGAAGGCGTAACCCGGCCGCTGCAAACAGTCTCACCAGGTCGAGGGACTAGACACCTCTCAACCTTT CAAGGGCCCGAGCGCACGCTCCGGGCCCTTTTTTTCGCCTGCCGCTGCCCGGCACACAACTTGCTCCATAATGCCTCCCAGCCACACGGGATTACCGAGC
DNA Sequence for Gene
>L321_17792
ATGCTGCACAGCCACCTGACCACCCTGAATGCGGTTTCGCTGATCCTCAACCTGTTCCGGGAAGACGGTTGCGAGGCGGTGGCGTTGCTGGCCGGCAGCG GCATTGGCCCGCACGACCTGGGGCACGCCGACGCACGCATCACCACCCAGCAGGAACTGCAGGTGTGCGCCAACGCCGTGGCGCGGCGCGAGGAGATCGG CCTGGAACTGGGGCAACGCATGCATGTGTCGTGCTACGGCATGCTGGGTTACGCACTGCTCTCCAGTGCCACTTTGGGTGACGCCTTGCGCCTGGCCCTG GAGTATCCGGCACTGCTGGGAACAGTCTTCCAGCTACGCCTGGTCGACGACGGCCAACGGGTCTGGTTCAGCGCCAGCGATTATCACGACAGCCCGGCAC TGGCCGCGTTCAATGCCGAGTTCTGCCTGGTTTCACTGAAAGTCATCTGTGACGACCTGCTCGGCCGACCGCTGCCGTTGCTCGGCGCGCGCTTCGAACA TGCAAGGCCTGGCTACCACGCACTGTATAGCCGTGCATTCCAATGCCCCCTGAGCTTTGCCGAAGAAGACAACGCCTTCGCCTTCGAGCGGCGCTGGCTC GACACCCCGTTGCCGCTGGCCGACCCGATTACCCACAAGGCCATGAGCGAACGCTGCCGGCGGCTGAATCTGGAGTTCACCGGGCGTCAGGCCTGGCTTG GGCGGATTCGCCAGCTGTTGCTGCAACAACTGGATGCTGCGCCGGGCCTTGAAGGCCTGGCGCGGCAGATGAACTGCTCGTCGCGGACCTTGCGTCGGCA TTTGCAGGCACTGGGGAGCAGTTATCAACAGCTGCTCGATGACCTGCGCTTCGAGCGGGCCAAGCAATTGCTGGCGGATGAGCAGATGCCGATCTATCGG ATAGCCGAGACCCTGGGATTCAGTGAAACGGCCAGTTTTCGACATGCTTTCCAGCGTTGGAGTGGGGTTGCGCCTAGCCATTTTCGGGGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGTTACTGGCCAGCGACCTTGGCCACATCGATCCCCTTTTGGCCGTTTGCATCGTTCTCCACTCGCAGATCGCCCATGAGAATGGGCCCACGCCTGTCCC TCCTGAGAACAACAAAATGCTGACAATCTATTCCGATGACCACCGCCTGCACCACGGCCGCTGCGAGCTGATCGACGGCAAGCTGATGCCTTGCTTCGAA ATGCCTTCGCGCGCCGATCATGTGCTCGAGCAGGTAAAGAAGCGCAACCTCGGTGAGGTTCAAGGCCCGACCGACTTCGGCCGCGCGCCCTTGCAGCGCA TCCACAGCGCCGACTACCTCGACTTCTTCGAAGGCGCCTGGGCCCGCTGGGCCGCGCTGGGTCACGATGGCGACCTGCTGCCCTTCACCTGGCCTGCGCG CACACTGCGCCAGGTGAAACCGACCGGTCTGCACGGCGAGCTGGGCTACTACAGCTTCGACGCCGGCGCCCCGATCACCGCCGGCACCTGGCAAGCCGCC
Amino Acid Sequence
>AraC family transcriptional regulator
MLHSHLTTLNAVSLILNLFREDGCEAVALLAGSGIGPHDLGHADARITTQQELQVCANAVARREEIGLELGQRMHVSCYGMLGYALLSSATLGDALRLAL EYPALLGTVFQLRLVDDGQRVWFSASDYHDSPALAAFNAEFCLVSLKVICDDLLGRPLPLLGARFEHARPGYHALYSRAFQCPLSFAEEDNAFAFERRWL DTPLPLADPITHKAMSERCRRLNLEFTGRQAWLGRIRQLLLQQLDAAPGLEGLARQMNCSSRTLRRHLQALGSSYQQLLDDLRFERAKQLLADEQMPIYR IAETLGFSETASFRHAFQRWSGVAPSHFRG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site