Pseudomonas plecoglossicida NB2011, L321_17657 (cls)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida NB2011 genomic scaffold PT1_scaffold80, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTTGGGGCAGCTGAACTCGAACTTCCATACGTTCCCGGTACGGTCGGTAATTTTCTGAGTACAGCCAGACTGGGGATCCTGCAACGGAATATCGTTGGT CTGCACCTGCTCCTGCGTCAGGCACGAGCGAACGCCGTTACCCCCGACCGTGATGCCCTGCTTGGCCAATACCCCTTCCATCATTGCCCGTTGCTCAGGC GGCAGATTCTTCAACTGCCCCAGCATGAACTGCATGTCAGGCAACGGCTTGCCGTCGACCTGCATATTGCTGGTGGTCAGCTCCCACAGGCCAGGTTGCA ACATCTGCGCATGCACCAGTGGGCTGCTCAGGCCAAGGGCAAGTGCCAGCAGTGGCAGACGTATCTTCATGAACCAACGCTCCTCGAAAAACCGGCCAAC GGGCCGGGGTGAGCCTTAGACGCCAAATCCGCATTCAGGTTGCAACGCGGGTCTGTAACGTGTTCTGTTATCCGCTGTGTATTCGGCAAGCAGGATGCGT
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| DNA Sequence for Gene |
>L321_17657
|cls
ATGGATTACCACAGCCCCTACTTCTTCGGCTACGTGCTCGGCATCATTCATTTGCTTGGCATCATCGCGGCGTTGCATGCGGTGTTCACCGTGCGTACCG CCCAGGGCGCAATCGCCTGGGCCATGTCACTGTTCTTCATCCCCTACTTCACATTGATCCCCTACCTGATCTTCGGCGCTCGCTCGTTCTACGCCTACAT CCAGGCCCGGCGCCAGGCCAACCAGGAAATGCACGTGGCCATGGCCAACCTCAATTGGCGCCCGTGGGTGGAAGAGGCGCTCACGGCGCGGGAGTCGCAA AGCTATGCCGCCTTGCGTGCCATGCCGAAACTCGGCCGTATGCCGTGTCTGGCCAATAACCAAGTAAAGCTTCTGATCGATGGCCAGGCCACGTTCGATG CCATCTTCGACGCCATTGCCCAGGCACGGAAAGTGGTACTGGTACAGTTCTTCATCATCCACGACGACACCCTCGGCAAGGCCCTGCAGCAATTGCTGCT GCGCAAGGCGGCCGAGGGGGTGCAGGTATTCGTGCTGTATGACCGGGTCGGTAGCCATGCCCTGCCCGCCAGCTACAGTCAGGCACTTCGTGAAGGTGGC GTGCAGATCCACGCCTTCGCCACCCGTCGCGGCCTGTTCAATCGCTTCCAGGTAAACTTCCGCAACCATCGCAAGATCGTCGTGGTCGATGGCATGGCCG GGTTCATTGGCGGGCACAATGTCGGGGACGAATACCTCGGCGCCCACCCCCATCTTTCACCCTGGCGCGATACCCATGTGCAGATCAGCGGCCCGGTGCT GGCCTGCCTGCAAGAGTCGTTCGCCGAGGACTGGTACTGGGCTGCCCGGCAACTGCCACCGCTGATCTTGCCGGACGCTTATCCTGACAACGGCGTGCTC TGCCAGGCACTGGCAAGCGGCCCTGCCGATCCCCAGGAAACCTGTTCGCTGTTCTTCCTCGAGGCCATCCATTCCGCCACACGGCGGGTATGGATCACCA GCCCGTACTTCATCCCCGACGAGGCAGTGTTCGCGGCCATGCGGCTGGCGGTGCTGCGCGGGGTGGATGTGCGAGTGCTGATACCGGCACGACCCGACCA TCGCATCGTCTATGCCGCATCCAGTCTGTTCGCATTCGAGGCAGTGCGCGCAGGCGTGCGCATGTTCCGCTACCAGCCGGGCTTCCTGCATCAGAAGGTG GTGCTGGTGGACGACGAGGTCAGTGCGATTGGCAGCGCCAATCTGGACAACCGCTCGTTCCGGCTCAACTTCGAGATCACCCTGCTGACTGTCGACCGCG CATTCGCCGACAAGGTCGAGCGCATGTTGCTGGACGACTTCGAGCAGGCCAGGGAAATCACCGCAGAGGACAGCCGCGACACCCATCGCATCCAGCAACT CGGGATGCGCATCGCAAGGCTGATTTCACCGATCCTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGAGACCGGGGCCGCTGATGCGGCCCCGGTTCATTGCTTCAGCGATACAGGTCTTCACGTGTCCACGGCAGGTCATGATGCCCGTCGGCATAAGGTTTCA CCGCCAGGATCTGATGCAGGTTGATCCACCCTTTCTGGAAGGCATAGGCACACCCCGCCAGGTACAGCCGCCAGATGCGCAAGGTTTTCTCCGGCACCAG CGTCGCCGCCTTGTGCAACTGGTTCTCCAGGTTCTCGCTCCAGTGGTTCAGGGTCTTGGCGTAGTGCAGGCGCAGGCTCTCCACGTCCACTACTTCCAGC CCCGCTTCACAGATGCTCGCAGTGATCATCGACAAGTGCGGCAACTCGCCATGGGGGAACACATAGCGGTCGATGAACTCACCCGCGCCCCGCCCGACCG GGCGGCCATCGATATGCTTGGCGGTGATACCGTGGTTCATCACCACACCCCCTTCACGCACGGCTGCGAACAGCTTCTGGCTATACAGCGCCAGGTTGGC
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| Amino Acid Sequence |
>cardiolipin synthetase
MDYHSPYFFGYVLGIIHLLGIIAALHAVFTVRTAQGAIAWAMSLFFIPYFTLIPYLIFGARSFYAYIQARRQANQEMHVAMANLNWRPWVEEALTARESQ SYAALRAMPKLGRMPCLANNQVKLLIDGQATFDAIFDAIAQARKVVLVQFFIIHDDTLGKALQQLLLRKAAEGVQVFVLYDRVGSHALPASYSQALREGG VQIHAFATRRGLFNRFQVNFRNHRKIVVVDGMAGFIGGHNVGDEYLGAHPHLSPWRDTHVQISGPVLACLQESFAEDWYWAARQLPPLILPDAYPDNGVL CQALASGPADPQETCSLFFLEAIHSATRRVWITSPYFIPDEAVFAAMRLAVLRGVDVRVLIPARPDHRIVYAASSLFAFEAVRAGVRMFRYQPGFLHQKV VLVDDEVSAIGSANLDNRSFRLNFEITLLTVDRAFADKVERMLLDDFEQAREITAEDSRDTHRIQQLGMRIARLISPIL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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