Pseudomonas sp. GM25, PMI24_01762
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. GM25 PMI24_contig_56.56, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCATCAATAAACGTGCCGGGTGCCCCGCTTTCGCATCGGGCCGTGCTTTGATCTTTTTGTAACTGACTGATGTTTATCAGTTTTAATTATTCACCTTGT GAGGCCGCGAAAACTTGACTGAACACTCAGGCTAAATGCCAGGCAAGTTGTCCGAACTGTCAGGACTCAATCTGGTGCACTGCATTACTTTTCTTCAGAA CGCATCACCCGCAGCTCAACTTCAAGCGGCTGATTTCACATAGGAAATCTTGCTCATATTTCCAACCTGTCAAGTGCGTCAAAATGGTGAAGCGCCTCAC CATTTTGGTGATTTTGTATTTTTATCGTTATTTATCAGTTACTTAAAACAGTCATAAGCTTATAAAAAATAATCTTGATCAATTGCAGAACTGCGACTAG CGTCTATTCCTGACAGCGCTGACAAGATTACGCATTTGGCGCTGCAAACAATAAAACACTAGAACCGGCACAAGTCGGTCATGCCTGCGAGGAACTCGGA
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| DNA Sequence for Gene |
>PMI24_01762
ATGTCTCTGTTGATCCGTGGCGCCACCGTTGTTACCCATGATGAAAGTTACCGCGCCGATGTCTATTGCGCTGACGGCGTGATCAAAGCCATTGGTGAAA ACCTGGATATTCCCGCCGGCGCCGAAGTGCTCGACGGCAGCGGCCAATATTTGATGCCCGGCGGCATCGATCCGCACACCCACATGCAACTCCCGTTCAT GGGCACCGTGGCCAGCGAAGACTTCTACAGCGGCACTGCCGCAGGCCTGGCCGGCGGCACCACCTCGATCATCGATTTCGTGATTCCTAATCCGCAGCAG TCACTGCTCGAAGCCTTTCACCAGTGGCGTGGCTGGGCGGAAAAATCGGCGTCCGACTATGGCTTTCACGTCGCGATCACATGGTGGAGCGAGCAGGTGC GCGAGGAAATGGCCGAGCTGGTCAGCCATCACGGGATCAACAGCTTCAAACATTTCATGGCCTACAAGAACGCGATCATGGCCGCCGACGACACGCTGGT GGCGAGCTTCGAGCGCTGTCTGGAACTCGGCGCGGTGCCGACCGTGCACGCGGAAAATGGCGAGCTGGTCTATCACCTGCAACGCAAGTTGATGGCCCAG GGCATCACCGGGCCGGAAGCGCATCCGCTGTCGCGCCCCTCACAGGTTGAAGGTGAAGCGGCGAGCCGGGCGATCCGCATCGCTGAAACCATCGGCACGC CGCTGTACCTGGTGCACGTCTCGACCAAGGAAGCCCTCGACGAAATCACCTATGCCCGCAGCAAGGGCCAACCGGTCTACGGCGAAGTGCTGGCCGGGCA TCTGCTGCTGGACGACAGTGTCTATCAGCACCCGGACTGGCAGACCGCCGCCGGTTACGTGATGAGCCCGCCGTTCCGCCCGCGCGGGCATCAGGACGCG CTGTGGCATGGTTTGCAAAGCGGCAACCTGCACACCACCGCCACCGACCATTGCTGCTTCTGCGCCGAGCAAAAAGCCGCCGGGCGCGACGACTTCAGCA AGATCCCCAACGGCACCGCCGGCATCGAAGACCGCATGGCAGTGTTGTGGGATGAAGGGGTGAACTCGGGGCGGTTGTCGATGCAGGACTTCGTCGCCCT CACCTCCACCAACACTGCAAAAATCTTCAACCTCTACCCGCGCAAAGGCGCGATCCGTGTCGGTGCCGATGCCGACCTGGTGCTGTGGGACCCGCAAGGC ACTCGCACCATCTCCGCCAAGACCCACCATCAGCAGGTGGACTTCAACATCTTCGAAGGCAAGACCGTGACCGGCGTGCCGAGCCATACCATCAGCCAGG GCCGGGTCGTCTGGGCCGACGGCGACCTGCGCGCCGAGCGTGGGGCGGGCCGGTATATCGAACGGCCGGCGTATCCGGCGGTGTTTGATTTGCTGAGCAA GCGGGCTGAGTTGCATCGCCCGGTTGCCGTGAAACGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCCTGGATTACCGTTGATCGTTCCCACGCTATGCGTGGGAATGCCTCAAGGGACGCTCTGCGTCCAGTGACGCGGAGCGTCACGGGCTGCATTCCCACG CGGAGCGTGGGAACGATCAACAGATGATCGAACCACTGCCCGACAGAGGCAGAAAACCTCAAATAACCGTGAGGCAAAAAACCGTGATCGAGACCCTGAA CCATCTCCCGCACCCGCACGAAAGTGCGGCCGCCCTCGCCGGCCATTTCACCGACCTGGCGCCGCCGCTCAACGACCGTCAGGCGCATCTGGAAGCCTCG CGCTGCCTGTATTGCTACGACGCGCCGTGCGTGAATGCGTGCCCGAGCGAGATCGACATTCCATCGTTCATCCGCAACATCCATCAGGACAACGTGCCCG GCGCGGCGCAGAAAATCCTTTCGGCGAATATCCTCGGCGGCAGTTGCGCGCGGGTCTGTCCGACCGAAATCCTCTGCCAGCAAGCCTGCGTGCGCAACAA
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| Amino Acid Sequence |
>phenylhydantoinase
MSLLIRGATVVTHDESYRADVYCADGVIKAIGENLDIPAGAEVLDGSGQYLMPGGIDPHTHMQLPFMGTVASEDFYSGTAAGLAGGTTSIIDFVIPNPQQ SLLEAFHQWRGWAEKSASDYGFHVAITWWSEQVREEMAELVSHHGINSFKHFMAYKNAIMAADDTLVASFERCLELGAVPTVHAENGELVYHLQRKLMAQ GITGPEAHPLSRPSQVEGEAASRAIRIAETIGTPLYLVHVSTKEALDEITYARSKGQPVYGEVLAGHLLLDDSVYQHPDWQTAAGYVMSPPFRPRGHQDA LWHGLQSGNLHTTATDHCCFCAEQKAAGRDDFSKIPNGTAGIEDRMAVLWDEGVNSGRLSMQDFVALTSTNTAKIFNLYPRKGAIRVGADADLVLWDPQG TRTISAKTHHQQVDFNIFEGKTVTGVPSHTISQGRVVWADGDLRAERGAGRYIERPAYPAVFDLLSKRAELHRPVAVKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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