Pseudomonas sp. GM25, PMI24_00758

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM25 PMI24_contig_15.15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTCGCCTGCCGCGAACGCAGCACGTTCATTCCGATCCTCGCCAACAGCTTCGCCCGCCACACCACGGAAATCACCGTGGCCCACGCCGAACGCGAACACG GTGATTCGAAATACAGCCCGATGCGCCTGATCAACCTGATGTTCGACTTGATCACCTGCATGACCACCACGCCTCTGCGCCTGTTGAGCATCGTCGGTTT CGCCATGGCCGGGCTCGGCGTGCTGTTCGCGGCGGCGTTGATCGTCATGCGCCTGGCCTTTGGTGCCGGATGGGCCGGTGATGGCCTGTTCGTGCTGTTC GCTGTGCTGTTCGTGTTCACCGGTGGCCAGTTCATCGGCATGGGCCTGCTGGGCGAATACCTGGGGCGCATGTACAGCGACGTGCGCGCCCGCCCGCGTT TCTTCATCGAAAAGGTCCTGCGCGGCCACCCCGCCTCGCCGGCCCCCGCCATCACCGTTGACGGCCTCACTTCCAACTCCACGTCCGATCAGGTTCTCTC
DNA Sequence for Gene
>PMI24_00758
ATGAGCGCAAAAACCGTTGTCTTCGCTTACCACGATATTGGCTGCGCCGGCATTCAAGCCCTGCTCGACAGCGGCTACGACATTGCCGCGGTGTTCACCC ATGCCGATGACCCGCAGGAAAACGCGTTCTACGCCTCGGTCGCGCAACTGTGCGCCAACAAAGGCATCGCGGTTCATGCACCGGAAGACGCCAACCATCC GTTGTGGATCGAGCGGATTGCCAAGCTCAATCCGGATTACATCTTCTCCTTCTACTATCGCAACCTGCTGAGCGAGCCCTTGCTGGCCACCGCCAAAAAA GGCGCGTTCAACCTGCACGGCTCCCTGCTGCCACGCTACCGTGGTCGCGCCCCGGCCAACTGGGTGCTGGTCAACGGCGAAACCGAGACCGGCGTCACCC TGCACCGCATGGTCAAGCGCGCCGACGCCGGCGCCATCCTCGCCCAACAGCGTGTGGCCATCGAACGCAGCGACACCGCGCTGAGCCTGCACGGCAAACT GCGGATCGCCGCCAGCGACCTGCTGCGCGATGCACTGCCGGCGATGCTTCAAGGCAAAATCACCGAAACCCCGCAAGACGAATCCAAAGCCACGGTGTTC GGCCGTCGCACCGCGGCGGACGGCAAACTGGTCTGGGCCCAACCGGCGGAAAAACTGTTCAACCTCGTACGGGCCGTGACTCAGCCTTACCCCGGCGCCT TCTGCGCCGTGGGTGAGCACAAGCTGATCGTCTGGAGCGCCGACGTGGTCAAGGGCAACGAAGGCCAGGCGCCGGGCCGGGTCATCAGCGTCGACCCGCT GCGCATCGCCTGCGGTGAAGACTCGCTGGTGATCAACGCCGGCCAGCGCAACGACAACGGCCTGTACCTGAGCGGCCCGCAACTGGCCAATGAACTCGGT CTGGTGGACGGCTCGCTGCTGCGCGGCGCCGAGTCCGGTCGTGGCCCGCGCCGCACGCGGGTGCTGATCCTCGGCGTCAACGGTTTCATCGGCAACCATT TGTCCGAGCGCCTGCTGCGCGACGAGCGCTACGAAGTCTATGGCCTGGACATCGGCTCCGACGCCATCGACCGCCTGCGCAGCCACCCGCGTTTTCACTT CGTCGAAGGCGACATCAGCATTCACTCGGAGTGGATCGAGTACCACATCAAGAAATGCGACGTGGTCCTGCCACTGGTGGCCATCGCCACGCCGATCGAA TACACGCGCAATCCGCTGCGGGTGTTCGAGCTCGACTTCGAAGAAAACCTGAAACTGGTGCGCTACTGCGTCAAATACAACAAGCGCGTGATTTTCCCGT CGACCTCGGAAGTCTATGGCATGTGCCAGGACAAGCACTTCGACGAGGACAGCTCGAACCTGATCGTCGGCCCGATCAACAAGCAGCGCTGGATCTACTC GGTCTCCAAGCAACTGCTGGACCGGGTGATCTGGGCCTACGGCGCCAAAGGCCTGAACTTCACCCTGTTCCGTCCCTTCAACTGGATGGGTCCACGGCTG GATCGCCTCGATTCGGCGCGTATCGGCAGCTCCCGGGCCATCACCCAATTGATCCTCAATCTGGTGGAAGGCACGCCGATCCGCCTGTTCGACGGCGGCG AGCAGAAACGCTGCTTCACCGACATCGCCGATGGCGTCGAGGCGCTGGCGCGGATCATCGATAACGACAACGACGTCTGCAACGGCCAGATCATCAACAT CGGCAACCCGGACAACGAAGCGAGCATTCGTCAGTTGGGCGAAGAACTGTTGCGCCAGTTCGAGGCTCATCCGCTGCGTTCCAACTTCCCGCCGTTCGCC GGTTTCCGCGACGTGGAAAGCAGGGCGTTCTACGGCGCCGGTTACCAGGACGTCGAGCACCGCAAACCGAGCATCGCCAACGCCAAGCGCCTGCTGGACT GGACACCGACCGTGGAAATGCGCGAGACCATCGGCAACACGCTCGACTTCTTCCTGCGTGAAGCAATGGCCGAAATCGAGAGCAAGCGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGCAGGCCGGTTTGCGCATCGATGTCGACACCTTTCGCGGCACCCGCGAAGGCGTGCCGCGCTTGCTGGAAATTCTCGATGAAGCGCAGATCAAGGCGAC GTTTTTCTTCAGTGTCGGCCCGGACAACATGGGTCGGCACCTGTGGCGCCTGATCCGTCCGCAGTTCCTCTGGAAAATGCTGCGCTCCAACGCCGCCGGC CTGTACGGCTGGGACATCCTGCTAGCCGGCACGGCGTGGCCGGGCAAACCGATCGGCCGCGACCTCGGGCACCTGATGCGTCAGGCCCGGGCCGCCGGCC ACGAGGTCGGCCTGCACGCCTGGGATCACCACGGCTGGCAGGCCAATGCCGGGCGCTGGAGCGATGCGCAACTGGTCGAGCAGATCCGTCAGGGCGTCGA CACCTTGAGTGACATTCTTGGCGAAAAGGTCATGTGTTCCGCCGCCGCCGGTTGGCGTGCGGACGAGCGTGTGATCGAAGCCAAACAGGCCTTCGGCTTT
Amino Acid Sequence
>bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase
MSAKTVVFAYHDIGCAGIQALLDSGYDIAAVFTHADDPQENAFYASVAQLCANKGIAVHAPEDANHPLWIERIAKLNPDYIFSFYYRNLLSEPLLATAKK GAFNLHGSLLPRYRGRAPANWVLVNGETETGVTLHRMVKRADAGAILAQQRVAIERSDTALSLHGKLRIAASDLLRDALPAMLQGKITETPQDESKATVF GRRTAADGKLVWAQPAEKLFNLVRAVTQPYPGAFCAVGEHKLIVWSADVVKGNEGQAPGRVISVDPLRIACGEDSLVINAGQRNDNGLYLSGPQLANELG LVDGSLLRGAESGRGPRRTRVLILGVNGFIGNHLSERLLRDERYEVYGLDIGSDAIDRLRSHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIATPIE YTRNPLRVFELDFEENLKLVRYCVKYNKRVIFPSTSEVYGMCQDKHFDEDSSNLIVGPINKQRWIYSVSKQLLDRVIWAYGAKGLNFTLFRPFNWMGPRL DRLDSARIGSSRAITQLILNLVEGTPIRLFDGGEQKRCFTDIADGVEALARIIDNDNDVCNGQIINIGNPDNEASIRQLGEELLRQFEAHPLRSNFPPFA GFRDVESRAFYGAGYQDVEHRKPSIANAKRLLDWTPTVEMRETIGNTLDFFLREAMAEIESKR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site