Pseudomonas sp. GM25, PMI24_00757

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. GM25 PMI24_contig_15.15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCACGGCTGGATCGCCTCGATTCGGCGCGTATCGGCAGCTCCCGGGCCATCACCCAATTGATCCTCAATCTGGTGGAAGGCACGCCGATCCGCCTGTTCG ACGGCGGCGAGCAGAAACGCTGCTTCACCGACATCGCCGATGGCGTCGAGGCGCTGGCGCGGATCATCGATAACGACAACGACGTCTGCAACGGCCAGAT CATCAACATCGGCAACCCGGACAACGAAGCGAGCATTCGTCAGTTGGGCGAAGAACTGTTGCGCCAGTTCGAGGCTCATCCGCTGCGTTCCAACTTCCCG CCGTTCGCCGGTTTCCGCGACGTGGAAAGCAGGGCGTTCTACGGCGCCGGTTACCAGGACGTCGAGCACCGCAAACCGAGCATCGCCAACGCCAAGCGCC TGCTGGACTGGACACCGACCGTGGAAATGCGCGAGACCATCGGCAACACGCTCGACTTCTTCCTGCGTGAAGCAATGGCCGAAATCGAGAGCAAGCGTTG
DNA Sequence for Gene
>PMI24_00757
ATGCAGGCCGGTTTGCGCATCGATGTCGACACCTTTCGCGGCACCCGCGAAGGCGTGCCGCGCTTGCTGGAAATTCTCGATGAAGCGCAGATCAAGGCGA CGTTTTTCTTCAGTGTCGGCCCGGACAACATGGGTCGGCACCTGTGGCGCCTGATCCGTCCGCAGTTCCTCTGGAAAATGCTGCGCTCCAACGCCGCCGG CCTGTACGGCTGGGACATCCTGCTAGCCGGCACGGCGTGGCCGGGCAAACCGATCGGCCGCGACCTCGGGCACCTGATGCGTCAGGCCCGGGCCGCCGGC CACGAGGTCGGCCTGCACGCCTGGGATCACCACGGCTGGCAGGCCAATGCCGGGCGCTGGAGCGATGCGCAACTGGTCGAGCAGATCCGTCAGGGCGTCG ACACCTTGAGTGACATTCTTGGCGAAAAGGTCATGTGTTCCGCCGCCGCCGGTTGGCGTGCGGACGAGCGTGTGATCGAAGCCAAACAGGCCTTCGGCTT TCGCTACAACAGCGATTGCCGTGGGCAGCGGCTGTTCCGCCCGTTGCTGTCTGACGGCTCGGTCGGTGCGCCGCAGATTCCGGTGGACTTGCCGACCTTC GATGAAGTGGTCGGGCCGAGTGTGGCGGCGAAGGATTTCAACGCCTTCATCCTCGACCGGTTCCGCCCGGACAACCTCAACGTCTACACCATTCACGCCG AAGTAGAAGGGATTCTGATGGCAGAAGACTTTCGTCGACTGCTGGCCGACGCGCGCCAGCGACATATCCACTTTCAGCCCTTGGGCAATCTGCTGCCCGC GTTTCTCAACACCCTGCCCGTCGGCCGTGTGCAACGCGGTGCCCTCGAAGGCCGCGAAGGCTGGCTGGGAGTGCAAGGCACATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAAACGCTGGGCATTGCCGCTGTTGCTGGGGATTTTCCTGCTGGCCTATCTGCTGCCGCTGGGCAGTCATGGTTTGTGGATTCCCGATGAAACCCGTTA TGCGCAGATCAGCCAGGAAATGCTGCTGAGCGGCAACTGGGTGTCGCCGCATTTCATGAACCTGCGTTACTTCGAAAAACCGGCGGCCGGTTACTGGATG ATCGCCCTCGGGCAGGCCGTGTTCGGCCAGAACCTGTTCGGCGTGCGGTTTGCCTCGGCCCTGAGCACCGGGCTGAGCGTGCTGCTGTGCTTCCTCATCG CTCGCCGTTTATGGAATGACCCGCGCAAAAGCTTCGTCTGCGCCCTGCTCTACATGAGCTTCGTCATCGTCGCCGGCCAGGCTGGTTACGCCAACCTCGA TCCGCAATTCACCTTCTGGGTCAACCTGAGTCTGGTGGCGCTGTGGTTTGCCCTCGACAGCCGCGCCAACGGTCAGCGCCTGGCCGGTTGGGCGGTGTTG
Amino Acid Sequence
>4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase
MQAGLRIDVDTFRGTREGVPRLLEILDEAQIKATFFFSVGPDNMGRHLWRLIRPQFLWKMLRSNAAGLYGWDILLAGTAWPGKPIGRDLGHLMRQARAAG HEVGLHAWDHHGWQANAGRWSDAQLVEQIRQGVDTLSDILGEKVMCSAAAGWRADERVIEAKQAFGFRYNSDCRGQRLFRPLLSDGSVGAPQIPVDLPTF DEVVGPSVAAKDFNAFILDRFRPDNLNVYTIHAEVEGILMAEDFRRLLADARQRHIHFQPLGNLLPAFLNTLPVGRVQRGALEGREGWLGVQGT
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site