Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 assembly GCF_00068827, Q378_RS0112545
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 Q378DRAFT_scaffold00010.10_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAAGGTACTCGGTGAAGTCGGCAAGGGCTGGGATGTGGCCAACGCCTGGCTCACGGCTGGCCGGGTGATGGTCGCCGCCAACTGCGTCGGCCAGGCCCAG CGCGCGCTGGATGTGTCGCTGCAATGGGCGGCCGACCGCAAGCAGTTCGGCCAGCCGATCGGCACCTATCAGGGCGTGTCGTTCAAGCTTGCCGACATGG CCACGCAGATCCGCGCCGCCGAGCTGCTGACCCTGCACACCGCCTGGAAGATGGACCAGGGCAGCATGACCGACGGCGAGGCCGGCATGGCCAAGCTGTT CGCCAGCGAAGTGCTCGGCAAGGTCGCCGACGAGGCCGTGCAGATCTACGGCGGTATGGGCCTGATGGACGAAGGCCCGGTCGAGCGCATCTGGCGCAAC GCGCGGATCGAGCGGATCTGGGAAGGTACCTCGGAGATCCAGCGGCACATCATCTCGCGCGAACTGCTGCGCCCGCTGCTGCGCTGATCGGAGAAACGCC
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| DNA Sequence for Gene |
>Q378_RS0112545
ATGTCGCAAGCCATTCGTGACAACCTCAAACGCCTGCTGGCGCCCCGGCACCTGGCCTTCATCGGCGGGCGTAGCATGGCCCGCGCGCTCAAGCGCTGCG CCGACGGCGGCTACCCCGGCCAGATGTGGCTGGTGAACCCGCAGCAGGACAGCATCGACGGCGTACCCTGCGTGCGCAGCGTGGCCGAGCTGCCCTGCGC GCCGGACGCGGTGTTCATCGCCACCAACCGTGAACTGACCCTGACCTGTGTCGCCGAACTCGCCGCCAAAGGGGCGGGCGGGGCGATCTGCTATGCCTCG GGCTTCGCCGAATGTGGCGCCGAGGGCCAGGCCCTGCAACAGCAGCTGATCAAAGCCGCCGCTGACATGGCGCTGCTCGGGCCCAACTGCTACGGCCTGC TCGACTACCTGCACAGCGCCGCCCTGTGGCCTGTGGCCCACGGCGGCAAGGCGGTGGACAAGGGCGTGGCAGTGCTGACCCAGAGCGGCAATTTCGCCTA CAACCTGTCGATGAGCGACCGTTCGCTGCCGGTGGCCTACATGGCCTCGGTCGGCAACCAGGCGCAGTTGGGCATCGCCGAGTTGATGGACGTGCTGCTC GACGAGCCCCGCGTAACGGCCATCGGCCTGCACCTGGAAGGCCTGAAGAACGTGCCGGGCTTCGCTCGCGCGGCCCACAAGGCGCTGGAGAAGGGCATCC CGATCATCGCGTTGAAGACCGGTGTATCGCAAATCGGCGCGGAGCTTGCGCTCAGTCATACCAGCTCGCTGTCCGGCTCCGACGCCCTCTACGACAGCCT GTTCGAGCGCCTGGGCGTGATCCGCGTCAGCGGCCCGGTCAGCTTCGTCGAAACCCTCAAGGCCGCCGCCTGCGGCAACCTGCCCAAGGGTGACAGCCTG ATCGCGCTGGCCTGCTCGGGCGGCGATGCGGGGCTGATCGCCGACTACTCGGAATGCAATCAGCTGCGTCTGCCTGCCCTCGACGCTGGCCAGGTCGAGG AACTGGCCCAGGTGTTGCCGGCCTACGCCAACCTGGTCAACCCGCTGGACTTCACCACGGCGATCTGGGGCGACGGACCGGCCAAGCAACGCATGCTCGA CAGTGCCCTGCGCAGCGACGCCGACGCCGCGATGCTGGTGTTGGACTACCCCGCCGAATTCACCGGCGAGCGCAAGGAATGCGACCTGCTGCTGGAGCTG TACGGCGCGGCGCTCAAACGCCACGGCAAGACCGGCTTCGTCACCTCGGCCTTCCCCGAGCTGCTGCCGGCCAGCGCCCGCGAGCGCTTGCACGCTGCCG GTGTACCGGCGCTGCAAGGGGTGGAGGATGGCCTGGCAGCATGGGGCCGGGTGGCCCGCTACGCGCAGAATCGTCAGGCCTTGTTGGCGCTGGGCGAGTC GGCGCTGGTACCGCTGTGCCCGCAGGCGCTTGCCGGTGACAGTCAGCTGCTCAACGAGTGGCAATCGAAACAGGCCCTGCGGGGCTTCGGTCTGCCCATC CCGAATGGCGTGTTGAGCAGCCCGCAGAACGCGCTGGACGATGCCCGCAAAGTTGGCTTCCCGCTGGTGCTCAAGGCCGTCAGCGCGCAGTTGCCGCACA AGACCGAGGCCGGTGCCGTGGCGCTGAACCTTGGCGACGAGGCGGCGCTCGGGCGTGCACTGGAGCAGATGCGCACACGCATTGCCGCCTACGCGCCAGA GGTTCCCTTCGATCAGGTCCTGCTTGAACCCATGGCCGGTGCGCCACTGGCCGAGCTGATCGTCGGCATCAAGCGCGAGCCGGACTTCGGCCTGGCGCTG GTGATCGGCGCGGGCGGCATCCTCGTCGAGCTGCTCAAGGACAGCAAAAGCCTGCTGCTGCCGACCACCGACGGTGCCATTCGCAATGCGCTGCTCGGCC TGCGCAGCGCGGCGCTGCTGCAGGGCTTCCGTGGCAAGCCGGCAGCGGACCTGGACGCGCTGGTCGCGGCCATCCGTGCCGTGGCCGACTACGCCTGCGA GAACGCCAGCCAGCTTTTGGAGCTGGATGTGAACCCATTGATGGTCGGTGCCACCGGCACCACCGCGGTCGATGCCTTGATCCGCCTCGGCCAGGTGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGACATGAACATGACGAACCAAACACTGACCGGTGGCCAGGCGCTGGTGCGCCTGCTGGCCAACTACGGGGTCGATACCGTCTTCGGTATTCCCGGTGTA CATACCCTGGAGCTGTATCGCGGCCTGCCCGGCAGCGGCATCCGCCACGTCCTGACGCGCCACGAGCAGGGCGCCGGCTTCATGGCCGACGGCTATGCCC GGGTCAGCGGCAAGCCGGGGGTGTGCTTCATCATCACCGGCCCCGGCGTGACCAACGCGGCCACCGCCATCGGCCAGGCCTATGCCGACTCGATCCCGAT GCTGGTGATCTCCAGCGTCAACCACACCGCGAGCCTGGGCAAAGGCTGGGGCTGCCTGCACGAGACCCAGGACCAGCGCGCCATGACGGCGCCGATCACC GCCTTCTCGACCGTGGCCCTGAAGGCCGAAGACCTGCCCGAGCTGATCGCCCGCGCCTACGCCGTGTTCGACAGCGAGCGCCCGCGCCCGGTGCATATCT
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| Amino Acid Sequence |
>acyl-CoA synthetase
MSQAIRDNLKRLLAPRHLAFIGGRSMARALKRCADGGYPGQMWLVNPQQDSIDGVPCVRSVAELPCAPDAVFIATNRELTLTCVAELAAKGAGGAICYAS GFAECGAEGQALQQQLIKAAADMALLGPNCYGLLDYLHSAALWPVAHGGKAVDKGVAVLTQSGNFAYNLSMSDRSLPVAYMASVGNQAQLGIAELMDVLL DEPRVTAIGLHLEGLKNVPGFARAAHKALEKGIPIIALKTGVSQIGAELALSHTSSLSGSDALYDSLFERLGVIRVSGPVSFVETLKAAACGNLPKGDSL IALACSGGDAGLIADYSECNQLRLPALDAGQVEELAQVLPAYANLVNPLDFTTAIWGDGPAKQRMLDSALRSDADAAMLVLDYPAEFTGERKECDLLLEL YGAALKRHGKTGFVTSAFPELLPASARERLHAAGVPALQGVEDGLAAWGRVARYAQNRQALLALGESALVPLCPQALAGDSQLLNEWQSKQALRGFGLPI PNGVLSSPQNALDDARKVGFPLVLKAVSAQLPHKTEAGAVALNLGDEAALGRALEQMRTRIAAYAPEVPFDQVLLEPMAGAPLAELIVGIKREPDFGLAL VIGAGGILVELLKDSKSLLLPTTDGAIRNALLGLRSAALLQGFRGKPAADLDALVAAIRAVADYACENASQLLELDVNPLMVGATGTTAVDALIRLGQV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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