Pseudomonas chlororaphis YL-1, P637_RS0115880
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis YL-1 contig60, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGGACTCCCACGTGGCGATCCCCAACGACGAGCGCAGCCTCGACGAGATTCGCGCCAAGGACCTGGTGCCTTTCGCGCGCCTGAGCAAGCAATTGGCGG CGGTGATGCCGGCCCACGTTATCTACCCTCAGGTCGATGCCCAGCCGGCCGGGTTCTCCCGCCGTTGGCTGCAAGAGATCCTGCGCGGTGAATTGCAATT CGACGGCGTCATCTTCAGTGACGACCTGTCGATGGCCGGTGCGCACGTGGTTGGCGATGCCGCGAGCCGGATCGAAGCGGCGCTGTCGGCCGGTTGCGAC ATGGGCTTGGTGTGTAACGACCGGGCGGCGGCCGAGCTGGCCTTGAGCGCGGCCCAGCGTCTGAAAGTGACACCGTCGGCGCGTATTGCGCGGATGCGCG GCCAGGCGTTCGCTTGCACCGACTATCGCCAGGATCCGCGCTGGCTGGCGGCGCTCGGCGCACTCAAGGATGCCCAGCTGATCGATTAAGGACTTTTGCG
|
|
| DNA Sequence for Gene |
>P637_RS0115880
ATGACGGTTTACGCGATTATCGGCGGTACCGGCCTGACCCGGCTCGAAGGCTTGAGCATTCACCAATCCTTGCCCCTGGACACGCCTTATGGCGCTCCGT CGGCGGATATCCAGAAGGGTGAATACGCCGGGCGCGAGGTGTTGTTTCTGGCGCGCCACGGTCATCCGCATCGCTTGCCGCCGCATCAGGTGAACTATCG GGCCAACCTCTGGGCGTTGAAGCAGGCTGGTGCCGAGGCGGTCCTGGCGGTCAACGCGGTGGGTGGCATTCATCCGGCGATGGGCTCCGGGCATTTCTGC GTGCCGCATCAACTGATCGACTACACCAGCGGTCGCGAGCACACCTACTTTGCCGACGACCTGGAGCAGGTCACCCACATCGACTTCAGCTATCCCTACA GCGAGTCGCTGCGCCAGCAGTTGATTGTCGCGCTGGAGGCCGAGGGCTGTGAATTCAGCAGCCAGGGTGTGTACGCCTGCACCCAGGGCCCGCGCCTGGA GACCGTGGCGGAGATCGCCCGCCTGGAGCGTGACGGCTGCGACATCGTCGGCATGACCGGCATGCCGGAAGCGGCGCTGGCCCGTGAGCTGGAGCTGGAC TACGCCTGCCTGGCGCTGGTGGTGAACCCGGCGGCGGGCAAGTCCGCTGCGGTGATTACCATGGCCGAGATCGAACAGGCATTGCAGGGCGGCATGGGCA AGGTGAAGTCGACGCTGGCGCGGGTCCTCGCGGCAAACCTGTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCGCTGGTAAAGGCTGCGATCGAGCGCGTAGCGCTCGCAAAACCTGAATCCGCGTATTCACGCCTGCTGCGCAGCCGATCACAGGCTGCGCCAGCGGCTA CAGATCAGCGTCCGCCTTTCTTGTCGGGCAGCGGGGCGAAGAGGGCTTCGATGTCTTCGCTCTGCAGCTTCCAGTCGCCGGCCTTGCGCCCATCCAGCAC GCCCGCCGCCAGGTCGGACTTCTCCTGTTGCAGGTGCTGGATTTTCTCTTCCACCGTGCCGCGGGCAATCAACTTGTAGACGAACACCGGCTTCTCCTGG CCGATCCGATAGGCGCGGTCGGTGGCCTGGTTTTCCGTGGCCGGGTTCCACCAGGGGTCGTAGTGGATCACGGTATCGGCTTCGGTCAGGTTGAGGCCGA CGCCGCCGGCTTTCAGGCTGATCAGGAAGATCTGCAGCTTGCCGCTCTGGAAGTCCCTGACCGGCGTGCGGCGGTCGCGGGTCTGCCCGGTCAGCAGGGC
|
|
| Amino Acid Sequence |
>5'-methylthioadenosine phosphorylase
MTVYAIIGGTGLTRLEGLSIHQSLPLDTPYGAPSADIQKGEYAGREVLFLARHGHPHRLPPHQVNYRANLWALKQAGAEAVLAVNAVGGIHPAMGSGHFC VPHQLIDYTSGREHTYFADDLEQVTHIDFSYPYSESLRQQLIVALEAEGCEFSSQGVYACTQGPRLETVAEIARLERDGCDIVGMTGMPEAALARELELD YACLALVVNPAAGKSAAVITMAEIEQALQGGMGKVKSTLARVLAANL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|