Pseudomonas chlororaphis YL-1, P637_RS0101170
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis YL-1 contig10, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCGCGGCCCATGGCCTGAAGCTGGTCACCCCGCGCGAACACGACAAGCGCGGCAGCCATGTCAGCTTCGAACACCCCGAAGGTTATGCGGTGATCCAGG CCCTGATCGCCCGGGGCGTGATCGGCGACTACCGCGAACCGCGGATCATGCGCTTCGGTTTCACGCCGCTGTACACCCGCTTCAGCGAAGTCTGGGACGC GGTGCAGATCCTCGGTGAAATCCTCGACGAAAAGACCTGGGCCCAGCCGCAGTTCCAGATCCGCCACAGCGTGACCTGAAGCCCGCTACCTGTAGCCGCT GGCGCAGCCTGCGATCGGCGGCGCAGCCGTCGCAAATCCTGAGTCCATGGTCTGCCGGATAGACCCCGGCGCCTGGGAATGCGAGTCCTGCGGCCTCGAT CGCAGGCTGCGCCAGCGGCTACAGGGTGATACCAGAACCGGCCAGGGACGGCTCGCGACACCGATCAACGCGTGCAAACAATAATAAGAGGCTGATGAAC
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| DNA Sequence for Gene |
>P637_RS0101170
GTGACCACGACCAACAAGGGTTTTGCAGCGATTTCCAATCGTGAACAGGGCTTGCGCCGCCAGCTCACGGCCGGGCAGATGAGCATGATCGCCATCGGCG GGGCGATCGGCACCGGGCTGTTCATGGGCAGCGCCTACGCCATCGGTTACGCCGGCCCCAGCGTGCTGCTCAGCTACGCCATCGGCGCGGTCATCACCCT GCTGCTGATGGGCTGCCTGGCGGAAATGACCGTGGCCCATTCCACCTCCGGCTCCTTCGGCGCCTATGCCGAGTTCTACATCAGCCCGCTGGCCGGGTTC CTGGTGCGCTACGCCTACTGGGCCGCCATCGTCCTGGCGGTCGGCGCCGAGGTCACGGCCATCGCCATGTACATGAAGTACTGGTTCGCCCACGTGCCGG AATGGGTGTGGATCGTCTCGTTCTCCAGCGTGCTGATCCTGCTCAACGCCATCAGCGTGAAAACCTTCGGCAACTTCGAATACTGGTTCTCCACCATCAA GATCGCCGCCATCGTCGGCTTCATCATTCTTGCGGTGTACGTGGTGTTCGGCTCCGGCAACGCCGACTACGGCCTGCACAACTACAGCGCCCACGGCGGC TTTTTCCCCAATGGCGTGCAGGGCATGTGGATCGCGGTGATCGTCTCGATCTTCAGCTACCTGAGCGTGGAGATGATCGCGGTGGCCGCCGGCGAGGCCG AGGACCCGCAGCGCGCGGTGAAAAAGGCCTTCCGCGCGACCATGGTGCGGCTGGTGGTGTTCTACCTGCTGACCCTGGCGCTGATGCTGGCCATCGTGCC CTGGGTCCAGGCCGGCAAGGCGCAGAGCCCGTTCGTCACGGTGATGCAGACCATCGGCATTCCCGGCGCCACCGGGGTGATGAACTTCGTGATCCTGATC GCCGCGTTGTCGGCGATGAACAGCCAGCTGTACATCACCACGCGCATGATGTTCAGCCTGTCCCGCGGCGGTTATGCACCGAAGTCCATGGGCGCCCTGA GCAAGTCCGGCATCCCGCTGAACGCCTTGCTGCTGTCCAGTTCCGGCATCGGCCTGGCGACCCTGATCAACGTGCTGTACCCGGAAAGCTCGTTCACCCT GATGATGGCGATCTCGATGTTCGGCGCGATCTTCACCTGGTTCATGATCTTTCTCACCCACTACTGCTTCCGCCGTTACCACCAGCGCCATGGCGAGCAG CCGCTGTCGTTCCGCATGCGCCTGTTCCCCTGGAGCACACTGCTGGGCCTGGTGCTGATGGGCGCGGTGATGATCACCACCTACTTCACCGAGGCCTTCA AGATGACCCTGGTGTTCGGCGTGCCCTTCCTGGCGATCCTGACGGCGGTCTACTTCGCCTGCTTCAGAAAACCCCGAGCCGCCGAGCTGACCCCGTCCAA GGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCCAAACCTGTAGGAGCGAAGCTTGCTCGCGATCCGCGCAGCGGCCATCCACCGTTGTGCTTCGGCGGATGCCATCGCGAGCAATCGAGCGTCGACCGG CTGCTCCTACAGTTGCCCCAGGGTTTCCAGGAGGGCCTTGGCATAGGCGGGCAACTGCTCGAAATTCCGGGCGCACAGCAGCAACTTGCGTTGCGCCCAG GCCTCCATCAGTGGCAGCACTGTGAGCGAGGCATCCGGCCCCCGGCGTTCGACGGCGGCCCGGGGCACCACCGCCAGCCCGGCGCCCCGGGCGACCATGC GCATCACCCCATCGAAGCCGTCGGCGCGGATGCGGATCGGCATCCGCAGCCCCAGGTGCAAGGCCTGCTCTTCCAGGTACACGGCCAGGGCGCTGTGGGC GGCGAGGCCGACATAGTCGTGGTGCAGGCTGTCGCTGAAATTCACCGCCCGACCGTCCGCCAGCGGGTGCTGGGCGGGCAGGACCAGCACCAGCGGGTCG
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| Amino Acid Sequence |
>amino acid permease
MTTTNKGFAAISNREQGLRRQLTAGQMSMIAIGGAIGTGLFMGSAYAIGYAGPSVLLSYAIGAVITLLLMGCLAEMTVAHSTSGSFGAYAEFYISPLAGF LVRYAYWAAIVLAVGAEVTAIAMYMKYWFAHVPEWVWIVSFSSVLILLNAISVKTFGNFEYWFSTIKIAAIVGFIILAVYVVFGSGNADYGLHNYSAHGG FFPNGVQGMWIAVIVSIFSYLSVEMIAVAAGEAEDPQRAVKKAFRATMVRLVVFYLLTLALMLAIVPWVQAGKAQSPFVTVMQTIGIPGATGVMNFVILI AALSAMNSQLYITTRMMFSLSRGGYAPKSMGALSKSGIPLNALLLSSSGIGLATLINVLYPESSFTLMMAISMFGAIFTWFMIFLTHYCFRRYHQRHGEQ PLSFRMRLFPWSTLLGLVLMGAVMITTYFTEAFKMTLVFGVPFLAILTAVYFACFRKPRAAELTPSKV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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