Pseudomonas aeruginosa CF_PA39, AX20_RS0126175
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa CF_PA39 scaffold50, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGACGCGGAGATCGACGAACTGCTGCTCGACCCCGGCATCATCCGCAATCGGGCCAAGCTCAACGCCGCGCGGCAGAACGCCCAGGCCTGGCTGGAGC TGGACGACCCGGCTGGGTTCCTCTGGTCCTTCGTCGGCGGCCAGCCGAAGATCAACCATTTCGCCGGTCGCGCCGAGGTACCGGCGATTACCCCGGAAGC CGAGGCCATGAGCAAGGCGCTGCGCAAGGCCGGCTTCAACTTCGTCGGGCCGACCATCTGCTACGCCTTCATGCAGGCCAGCGGCATGGTCATGGACCAT ACCCAGGACTGCGACCGTTACGCCCAACTCGTCGGCTAGCCGCCGTCCAGGACCTTCGTCCAGCGACAGTTCATCGTGGGCTTTTCCTGACGAATGCTCG GATGTTCCACGTGGAACATCGGCGCGCAGCGTAGCTTGGCTGCCGCCCTCGCCTTCTTCCTGGCGTACAATGCTTGTTCGAGTCGAGCGAGGAGTGTTTC
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| DNA Sequence for Gene |
>AX20_RS0126175
GTGGAGAAATTCAAAGGTGCCCTGGTGGTGGGGGCCCTGCGCCTGTTCGCATTATTGCCCTGGCGTGCCGTGCAAGGCGTCGGGGCCGGCATAGGCTGGC TGATGTGGAAATTGCCGAACCGGTCCCGCGAGGTAGTGCGGATCAACCTGTCCAAGTGCTTCCCCGAGTTGTCCGAAGCCGAACTGGAAAAGCTGGTCGG ACAAAGCCTGATGGATATTGGCCGGACCCTCACCGAAAGTGCCTGTGCATGGATCTGGCCGCCTGAAAAGTCGCTGAGATACATCCGCGAGGTCGAGGGC ATGGAGGTGCTGGAGGAGGCACTGGCTTCCGGCGATGGCCTGGTCGGCATCACCAGTCACCTGGGAAACTGGGAAGTACTCAATCACTTCTATTGCTCCT ACGCCAAGCCGATCATCTTCTATCGTCCGCCCAAGCTGAAGGCAGTGGACGAGTTGCTGAAGAAGCAACGCGTGCAATTGGGCAACCGCGTCGCACCTTC CACTCCGGAGGGTATCCTCAGCGTCATCAAGGAAGTGAAGAAAGGCGGTTGCGTAGGGATTCCCGCCGATCCCGAACCCGCGCGTACCGCTGGGCTCTTC GTGCCCTACCTGGGCACCACTGCATTGATCAGCAAATTCGTCCCGCAGTTGCTTTCACGCGGCAAGGCACGCGGAGTGTTCTTCCATGCGGTGCGCCTGC CCGATGGTAGCGGTTACAAGGTGATCCTCGAAGCGGCTCCGGCGGATATGTACGACAAGGACCTGGAAGTGTCTGTAGCAGCCATGAGCCGCGAGCTGGC GAAGTATGTACGGGCCTATCCCAGTCAGTACATGTGGAGCATGAAACGCTTCAAGAATCGCCCGGACGGCGAGAAGAAATGGTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGAAAGGGCGTCGGAAGACGCCTTTTTCATATCCGGGTACTATGCTCAGCTCTGCCTCCTCCGCAGGTCCCCGAGGGACTCGATGGATAATCAACGACAA TACCCACGAACCCCGCTCAAGTGCCGAATCCGTATCAGCCACCCGCTATTCGGCGAGCTGATGGCGCAGACCCGCGACCTGTCCGACACCGGGGTCTATG TCAAACACCCTGATCTGACCCAGCTCCCGCCAGGCAGTGTCGTTACTGGCCAGGTACAGGACTTGCCGATCGACGCGCCGATACTGAAGATGGAAGTCGT GCGGGTCGATGCGGACGGCGTTGGCCTGCGCTTTCTCAGCGAGGCCTGAGCGGCGATGTTCCACGTGGAACCCCAGGCATGCATGAGCCACTGATCACAG AGTGGGCGAAACCGCCGACGGTTATCGGCTAGAATGCGCGCCGCTCGGCATGGTGCCGGGCATGGGTTCCCTCACCCCATCGCGCAAAAAGGACAGTACA
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| Amino Acid Sequence |
>lipid A biosynthesis lauroyl acyltransferase
MEKFKGALVVGALRLFALLPWRAVQGVGAGIGWLMWKLPNRSREVVRINLSKCFPELSEAELEKLVGQSLMDIGRTLTESACAWIWPPEKSLRYIREVEG MEVLEEALASGDGLVGITSHLGNWEVLNHFYCSYAKPIIFYRPPKLKAVDELLKKQRVQLGNRVAPSTPEGILSVIKEVKKGGCVGIPADPEPARTAGLF VPYLGTTALISKFVPQLLSRGKARGVFFHAVRLPDGSGYKVILEAAPADMYDKDLEVSVAAMSRELAKYVRAYPSQYMWSMKRFKNRPDGEKKWY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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