Pseudomonas chloritidismutans AW-1, F753_22370
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chloritidismutans AW-1 Scaffold_73_Contig_1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTCGATGTTCTGGACTGAACATCAGCAGGTCCCTGACAGCCACGCCACGATGTAGTGCCCCGAAAAAAACACTACAAAACGATTGACGATGCAATTTCAG CGGAGCATTATTGCCCCGCTCCCGCTAACCAGGGGCCCTGGCAAGGGTCTCCGGGGCGTGCTCAAGCCAACCAGCCGAGCCGTTCCGTGACTGTACTGCC CACAAGGCGGACTGACGAGGTTGCGACTGGAACGAGTCGTCCTGAGGGACGGGGTAGCGATTGACGCATCAGCCAGACTGAAAGCTTCTCGTTGTTGTAG CGCACACGGCAGCCACGCCGGCTGTGGGCGCAGCAACCGGAACCAGCCCGGCGGTCGTATCCCCCTTCTCTTGGTTCAATCCTCGTCCCGGTCGATATTT CGACGCTCTGCCGCGTGTTGCCCGCAATGATCAGCGATAGCACGTAGGTTTCGGTGGGAAAAGTCGGTGCTCAACCACACTCATTTTTGAAGGATTGAAC
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| DNA Sequence for Gene |
>F753_22370
ATGTCCGCATATCAAGACGACATCAAGGCAGTTGCCGCCCTGAAAGAGCAATACGGCAGCAGCTGGGCCGCCATCAACCCTGAGTCCGTCGCTCGCATGC GCGCCCAGAACCGCTTCAAGACCGGTCTGGAAATTGCTCAGTACACCGCCGACATCATGCGCAAGGACATGGCCGAGTACGACGCCGACTCGTCCGTCTA CACGCAGTCCCTCGGTTGCTGGCATGGCTTCATCGGTCAGCAGAAGCTGATCTCCATCAAGAAGCACCTGAAGACCACCAACAAGCGTTACCTCTACCTG TCCGGCTGGATGGTTGCTGCTCTGCGCTCCGAGTTCGGCCCGCTGCCGGACCAGTCCATGCACGAGAAGACTGCCGTTTCCGACCTGATCGAAGAGCTGT ACACCTTCCTGCGTCAGGCTGACAGCCGCGAGCTGGACCTGCTGTTCACCGCTCTGGACGCCGCTCGCGAAGCTGGCGACAGCGCCAAGGCTGCCGAGAT CCAGAACCAGATCGACAACTACGAAACCCACATCGTACCGATCATCGCAGATATCGACGCTGGCTTCGGTAACCCGGAAGCCACCTACCTGCTGGCCAAG CGCATGATCGAAGCAGGCGCTTGCTGCATCCAGATCGAGAACCAGGTTTCCGACGAGAAGCAGTGCGGCCACCAGGACGGTAAAGTGACCGTTCCCCACG CCGACTTCCTCGCCAAGATCGCAGCTGTGCGTTACGCCTTCCTCGAGCTGGGCATCGACAACGGTGTGATCGTTGCTCGTACCGACTCCCTGGGTGCCGG CCTGACCAAGCAGATCGCCGTGACCAAAGAGCCGGGCGACCTGGGCGACCTGTACAACTCCTTCCTGGATTGTGAAGAAGTCTCCGCTGCCGATCTGAAC AACGGTGACGTGGTTCTGAACCGCGAAGGCAAGCTGCTGCGTCCGAAGCGTCTGCCGTCCAACCTGTTCCAGTTCCGCGCTGGCACCGGTGAAGCACGCT GCGTACTGGACTGCATCACCTCGCTGCAGAACGGTGCTGACCTGCTGTGGATCGAAACCGAGAAGCCGCACGTTGGTCAGATCGCGGCCATGGTTGACGA AATCCGCAAGACCATCCCGAACGCCAAGCTGGTCTACAACAACAGTCCGTCGTTCAACTGGACCCTGAACTTCCGTCAGCAGGTCTTCGATGCGTTCGTC GCCGAAGGCAAAGACGTTTCCGCCTACGACCGCGCCAAGCTGATGAGCGTCGAGTATGACGAAACCGAACTGGCCCAGGTTGCAGACGAGAAGATCCGCA CCTTCCAGCGCGACGGTTCAGCTCACGCCGGCATCTTCCACCACCTGATCACCCTGCCGACCTACCACACCGCCGCGCTGTCCACCGACAACCTGGCCAA GGGCTACTTCGCCGACCAGGGTATGCTGGCGTACGTGAAGGGCGTTCAGCGTCAGGAACTGCGTCAGGGCATCGCCTGCGTCAAGCACCAGAACATGGCT GGTTCCGACATCGGCGACAACCACAAGGAGTACTTCGCTGGCGAAGCCGCTCTGAAGGCAAGCGGTAAAGACAACACCATGAACCAGTTCCACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAATCGGTTCGCGGCCTCACCGGCCGCAGGTGTTAACAAAAAGCCTCGGCATCTGCCGAGGCTTTTTTTTGCGAGCAAGCAGACTGCGTAGACGAGGCCA CATTTCGTCGGCACGACCCCTACCTGTCATTCTGTTGTCGCATATCGAATTTAGCGTCATGGCTCCGACAAAAATCGTAATGGAGCTGCGCCGTGACTAC TGAGAACAACGACATTTTGTTTGGCAACGGGGACGAGTTGCCCAGTAACCACTCGACGAACCCACACATTCAGGATGTGATCTCTGCTGGCCGTCGAAAG GTAGTGGTTGGCGGCGCAGCCCTGGGAGCCATGGCCTTTCTAGGTGCGGCTATTCCCGGACTTGCGCAAGCGGCTGAACCATCCGCGCAAGGACTCAAGG ACCTCCCCTTCCGACGCCGTACCCGTCTGCCGTTTTCGCCAGTGGCGGTAACGCGGGCCGATGCTATTACCGTTCCTGCTGGCTATTCCGCGACCACTTT
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| Amino Acid Sequence |
>isocitrate lyase
MSAYQDDIKAVAALKEQYGSSWAAINPESVARMRAQNRFKTGLEIAQYTADIMRKDMAEYDADSSVYTQSLGCWHGFIGQQKLISIKKHLKTTNKRYLYL SGWMVAALRSEFGPLPDQSMHEKTAVSDLIEELYTFLRQADSRELDLLFTALDAAREAGDSAKAAEIQNQIDNYETHIVPIIADIDAGFGNPEATYLLAK RMIEAGACCIQIENQVSDEKQCGHQDGKVTVPHADFLAKIAAVRYAFLELGIDNGVIVARTDSLGAGLTKQIAVTKEPGDLGDLYNSFLDCEEVSAADLN NGDVVLNREGKLLRPKRLPSNLFQFRAGTGEARCVLDCITSLQNGADLLWIETEKPHVGQIAAMVDEIRKTIPNAKLVYNNSPSFNWTLNFRQQVFDAFV AEGKDVSAYDRAKLMSVEYDETELAQVADEKIRTFQRDGSAHAGIFHHLITLPTYHTAALSTDNLAKGYFADQGMLAYVKGVQRQELRQGIACVKHQNMA GSDIGDNHKEYFAGEAALKASGKDNTMNQFH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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