Pseudomonas chloritidismutans AW-1, F753_15685
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chloritidismutans AW-1 Scaffold_55_Contig_1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGACGCTCAAGAGTCTCGGCGTGCGGGTGGCGCTGGACACCAGTGGTGCCGCGTTGCGTGACGGGCTGGCCGCCACGCCCTGGTTGATCAAGCCCAACG AGGAAGAGCTGGCCGAGGCCCGTGGCGTTGATCTCACCGGCTCTTCGGCGCTGCTGGCCGAAGCGCGGCGGCTGCAAACCGAAGGCATCGAGCATGTGGT GGTTTCGCAGGGCGCTGACGGTGTCAGCTGGTTTTCATCAGGCGCGGCACTGCATGCAAATCCGCCCAGGGTTCGGGTCGTCAGCACCGTCGGTGCCGGC GACTCGCTGCTCGCCGGGATGCTTCACGGTTTGCTGGAAGGCTGGCCGGCAGAGCGCACCCTCACACAGGCCACGGCCATCGCCGCGCAGGCGGTCGGGC AGGTTGGGTTCGGCCTCACCGACACGGCTGAACTTGCGGAGCTTGAAGCTGCGGTGCGCCTGCAGTCGCTCAGCCAATAATTCGAACAAGAGGTGAAGGA
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| DNA Sequence for Gene |
>F753_15685
ATGAATCTTCTCATCGTCACGGCCTGCCCCAACGGAATGGTCACCAGCGTGCTGACTTCACGCCTGCTCGAAGCGGCCGCCCATCGTCTGGGCTGGTCGA CCGCCGTGGAAGTCCACGATCCCAAGGCCATCGGTTCGCCGCTGACGCCCGCGCAGATCGCCAATGCCGATCTGGTGGTGGTGGTGAAAACCGGGCCGTT GTCATTGCAGCGCTTCGTTGGCAAGCGCGTCGCCCAGTCCACGCCATCCGAGGCGCTGCTTGACCCGGAAGCCTTCTTGCGCAGTGCCGCGGACACCGCC AGCGAGCTGCAGCAGGCCGACGAAGCGGATGCGGCGCATACCAGCGGCAAGCCCAAGCTGGTGGCCATCACCGCCTGTCCGACCGGCGTGGCACACACTT TCATGGCGGCTGAAGCCCTGCAGCAGGCGGCGATCCGCAAGGGTTATGACCTGCAGGTTGAAACCCGCGGCTCGGTGGGGGCGCGCAATGTGCTCGAAGC CCAGGCCATCGAAGAGGCCGACGTGGTGCTGCTGGCTGCGGACATCGAGGTGGATGTCACCCGTTTCGCCGGCAAGCGCGTATTTCGCTGCGGTACTGGC GTCGCCCTCAAGCAACCCGATGCGACCCTGGATCGCGCGCTGGAAGAAGGCGCGGTGCTCGCTGGAGGCGCCGCTGCCAGCGCAAGTGGTGAACAGAAGG GCGAGAAGGCTGGCGTATACAAGCACCTGCTGACCGGCGTGTCCTACATGCTGCCGATGGTGGTGGCGGGCGGTCTTTTGATCGCACTGTCGTTCGTCTT CGGCATCGAGGCGTTCAAGGAGGAGGGCACGCTGGCCGCCGCGCTGATGAAGATCGGTGGCGAAACGGCCTTCCAGCTGATGGTGCCGCTGCTTGCCGGC TACATTGCCTATTCCATCGCGGACCGCCCGGGCCTGGCGCCTGGCATGATCGGTGGGCTGCTGGCCGGCACGCTCGGTGCGGGCTTTATCGGCGGAATCA TCGCGGGCTTTGTGGCGGGCTACGCGGCCAAGGCCGTGAGCCGCTGGATTCCATTGCCGGCGAGCATCGAATCGCTCAAGCCGATCCTGATCATTCCGTT GCTGGCGAGCCTGGTTACCGGCCTGGTGATGATTTACGTGGTCGGCACGCCGGTGGCGAAGATGCTCGCCGGGCTCACCGAATTCCTCGACACCATGGGC ACCTCCAACGCCATCCTGCTCGGTCTGCTGCTCGGCACCATGATGTGCGTCGACCTCGGCGGACCGGTGAACAAGGCCGCTTATGCCTTCTCCGTCGGGC TACTCGCGTCCCAGAGTTACGCGCCGATGGCCGCCACCATGGCGGCGGGGATGGTGCCGCCAATCGGCATGGGCATTGCCACTCTGATCGCCCGGCGCAA GTTCGCCCAGACCGAGCGCGAAGCTGGCAAGGCCGCGCTGGTGCTGGGCTGCTGCTTCATTTCCGAAGGCGCGATTCCGTTCGCTGCGAAAGACCCGTTG CGGGTGATTCCGGCCAGCATCGCCGGTGGTGCGCTGACCGGCGCGCTGTCCATGGCCTTCGGCGCAAAGCTGCTGGCGCCCCATGGCGGGCTGTTCGTGA TGCTGATCCCCAACGCCATCAATCACGCGCTGTTGTATCTGGCTGCAATCCTCGCCGGCAGCTTGGTAACCGGGGTGATCTACGCAGTAATCAAGCGGCC TGAAACGCAGCCGCTCAGTGTCGGGGCGACGGCGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAGTCGCAAAACGGCTGAACTAAAGCCCCGCCTATCGTATCCACTACAAGCTGGCGAGACTTTGTGTCAGAAAGTTTCGCCAGCTTTTTGCTTTTTGTT TTGAAGATGAATTGGCTGGAGAGCGTTGCATGAGTATCGATTACGGGCCGCGGCCCATGCGCATCACCCTGACCGCCGTGGTGGTTCTGCTACTGGGAGC GCTGATGGCGGTCGGTGGCGGCTACCTCGCAATGCTGGGTGGCTCCTGGTACTACCTGCTGGCCGGCATCGGACTGCTGGGCGTGGCCGGGCTGTTGTTC GCTCGACGCCGCGCCGCGATCTGGCTCTACGCGGTGCTACTGCTGGCGACGCTGGCGTGGACGCTGTACGAAGTCAGCTTCGACTGGTGGCAGCTGGCGC CGCGGATCGACCTCTGGTGCATCCTCGGCCTCTGGCTGATCCTGCCCTTCGTCAACCGCTACGTGAGCGACCGGCTGGTCTGGCGCGACGGTGCCAGTGG
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| Amino Acid Sequence |
>PTS fructose transporter subunit IIBC
MNLLIVTACPNGMVTSVLTSRLLEAAAHRLGWSTAVEVHDPKAIGSPLTPAQIANADLVVVVKTGPLSLQRFVGKRVAQSTPSEALLDPEAFLRSAADTA SELQQADEADAAHTSGKPKLVAITACPTGVAHTFMAAEALQQAAIRKGYDLQVETRGSVGARNVLEAQAIEEADVVLLAADIEVDVTRFAGKRVFRCGTG VALKQPDATLDRALEEGAVLAGGAAASASGEQKGEKAGVYKHLLTGVSYMLPMVVAGGLLIALSFVFGIEAFKEEGTLAAALMKIGGETAFQLMVPLLAG YIAYSIADRPGLAPGMIGGLLAGTLGAGFIGGIIAGFVAGYAAKAVSRWIPLPASIESLKPILIIPLLASLVTGLVMIYVVGTPVAKMLAGLTEFLDTMG TSNAILLGLLLGTMMCVDLGGPVNKAAYAFSVGLLASQSYAPMAATMAAGMVPPIGMGIATLIARRKFAQTEREAGKAALVLGCCFISEGAIPFAAKDPL RVIPASIAGGALTGALSMAFGAKLLAPHGGLFVMLIPNAINHALLYLAAILAGSLVTGVIYAVIKRPETQPLSVGATA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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