Pseudomonas chlororaphis HT66, M217_RS0123530

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis HT66 contig000040, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTGCTCTGGGTGCTGCTGATCTACTTCGGCACCGTCAACCTGATGCGCGCCCTGGGTGAGTTCTTCGGCAACCCGGAGCTGGAACTCAACGCCTTCGCCG CCGGGGTCATCGCCCTCGGCCTGTGCTTCGGCGCCTACGCCACCGAAGTGTTCCGTGGCGCGATCCTCGCCATCCCCAAGGGCCATCGTGAGGCCGGCGT GGCCCTGGGCCTGTCGAAATGGCGGATCTTCACCAAACTGATCATGCCGCAGATGTGGCGCATCGCCCTGCCGGGCCTGGGCAACCTGTTCATGATCCTG ATGAAGGACACCGCGCTGGTGTCGGTGATCGGTCTGGAAGAAATCATGCGTCACTCGCAGATCGCCGTGACCGTGTCCAAGCAACCCTTCACCTTCTATA TGGTGGCGGCCTTCATGTACCTGGGCCTGACCGTCCTGGCCATGACCGGCATGCACTTCCTGGAAAAACGCGCCGCTCGCGGCTTCGCGAGGAGCGCCCA
DNA Sequence for Gene
>M217_RS0123530
ATGAACTGGGAAGTGATCATCAAGTGGCTGCCCAAGTTGGCCCAGGGCGCCACGCTGACCCTGGAGCTGGTGGCCATCGCGGTCATCGCCGGCCTGCTGC TGGCCATTCCGCTGGGCATCGCCCGCTCGTCGCGCCTGTGGTACGTGCGCGCCTTGCCCTATGCCTATATTTTCTTCTTCCGCGGCACGCCGCTGCTGGT GCAGCTGTTCCTGGTCTACTACGGCCTGGCGCAGTTCGACGCGGTGCGTAACAGCGCGATGTGGCCGTACCTGCGCGATCCGTTCTGGTGCGCCACCGCC ACCATGACCCTGCACACCGCGGCCTATATCGCCGAGATCCTGCGCGGGGCGATCCAGGCCATCCCGCCGGGCGAGATCGAAGCGGCGCGGGCGCTGGGCA TGTCCAAGCCCAAGGCGCTGCTCTACATCATCCTGCCCCGGGCCGCGCGCATCGGCCTGCCGGCCTACAGCAACGAAGTGATCCTGATGCTCAAGGCCAG CGCCCTGGCCAGCACCGTGACCCTGCTGGAACTGACCGGCATGGCCCGCACCATCATCGCCCGCACCTACCTGCCGGTGGAGATCTTCTTCGCCGCCGGG GTGTTCTACCTGCTGATGTCCTATGTGCTGGTGCAAGGCTTCAAGCTGCTGGAACGCTGGCTGCGCGTCGAGCAGTGCCAAGGCCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGCACCGCTTCTGTAGGAGCGAGGCTTGCCCGCGATAAACGATAACGCGGTGTTTCAGACAATCCGCGACGTTCTTATCGCGGGCAAGCCTCGCTCCTA CAGCCCACACCCTGAGCCGCCCGCCATGCCCTCCATCCTCCAAGGCCCCGAACTCCTCACCCGCTTCCAGGCCCTGGACCGCTTCCTGCTCGACCATCAA CAGCTCTGGCGCCCACGCCCCTTCACCGAGCTGCAACTGCCCTGGGAAGCCCGGCACCGCGAACTCGCCCAATGGCTGCGCCAGCGCAGCCTGGACGATG CCGAGACCAGCCATAACCACCCCGAGCTGCTCGATGCTCCCGCGCCCTTCCCCGATCTGGCGCGGACCGCCGCTGCGCTAAGCGCCGTGGCCGAGCTGCC GACGCACGAGGTGCCAGCCGCCCGCCAGCGCCTCAACGTCGATGTACCCGGGCGTAAATGGCAACAGATCGAAGCCTTCTCCGCCTGCCTGGAGTTCACC
Amino Acid Sequence
>ABC transporter permease
MNWEVIIKWLPKLAQGATLTLELVAIAVIAGLLLAIPLGIARSSRLWYVRALPYAYIFFFRGTPLLVQLFLVYYGLAQFDAVRNSAMWPYLRDPFWCATA TMTLHTAAYIAEILRGAIQAIPPGEIEAARALGMSKPKALLYIILPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMARTIIARTYLPVEIFFAAG VFYLLMSYVLVQGFKLLERWLRVEQCQGR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site