Strain | Pseudomonas chlororaphis HT66 contig000040, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTTGCTGCTGGTCTCGCAGTTCACCCTGGCCGCGGACACCAAGAACGGCCTGCGCCCGAGCTTTTCCACAGCGGCGCCGCCGGCCCTCGGCGAAGAACTT TTTGACTATCTGCTATGCAAGGCGCAGCAGTTGCATGGCAAAGTAGCATCAGGGCGCTTCGGGGCGGATATGCAGGTCCATCTGGTCAATGATGGCCCGG TAACCTTCCTGTTACAGACCTGAAAGTGCTTGAAACATCTTTTTCGGCCGGAACCGGCCGAAAATAGGCGTTTTTCGCGATAAATACTTGGTCGCCCCTG ATGCGTTGTAACGCGGGCTACTAGATAATCGCGCGCTACGGGGATCAGCGTTCGTTGGTCCGTTTTTGACTTAGGTAGAGCCTTGTTCGGAACCGTTTGG GGAATCATTTAGCCCCATCGGAGTCGGAACAATGCTCGCCAACCTGGCATATAGATAGCTGGCCGTTGGTTTTTTGATCTGTTTTCGGCGAGGGTTGCTC
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DNA Sequence for Gene |
>M217_RS0123195
GTGATTGTTAGTCCCTGTAATGCACCAAAATTGTCTGCCAAACGGTTACGAAACGCACTGGTGACGGGCTCTGCGCTGCTTTGCCTGCTTAGCGCCGGCC AACTCTGGGCATTCAATCTGGATGATGTATCGGCCAAGGCTAAGGATCTGGCCGGGCAGAAGTACGAGGCTCCGCGCAGTAACCTGCCGAACGAATTTCG TGAGATGAAGTTCGCGGACTATCAGAAAATCCGCTTCCTGCCTGAAAAGGCCGAGTGGGCCAAGCAGAAAACCCCATTCAAGCTGTCCTTCTATCATCAG GGCATGCATTTCGATACGCCGGTGAAAATCAACGAAATCACCACGAACACCGTCGAAGAAATCAAATACGACTCGACGCGCTTCGACTTCGGCGACCTCA AGTTCGATCCTAAAGCCACCGAACAGCTCGGTTATGCGGGCTTCCGTGTGCTTTACCCGATCAACAAGGCGGACAAGCAGGACGAAATCATGACCATGCT CGGCGCGAGCTACTTCCGCGTCGTCGGCAAGGGTCACGTCTATGGTCTGTCGGCCCGTGGCCTGGCCATCGACACTGCATTGCCGTCCGGTGAGGAATTC CCGCGCTTTACCGAATTCTGGATCCAGCAACCCAAGCCGACCGACAAGCACTTGGTGATCTTCGCCCTGCTGGACTCGCCGCGCGCCACTGGCGCCTACC GCCTGACCCTGCGTCCGGGCAGCGACACCATCGTCGACGTCAAGGCCCGGATGTTCCTGCGTGACAAGGTCGGCAAGCTGGGCATCGCCCCGCTGACCAG CATGTTCCTGTTCGGCGCCAACCAGCCGTCGAAAGTCCTCAACTACCGTCGCGAGTTGCACGATTCCAGCGGCCTGTCGATCCATGCCGGCAACGGCGAG TGGATCTGGCGTCCGCTGAACAACCCGAAACACCTGGCCGTGAGCAACTTCTCGGTAGAGAACCCGCGTGGTTTCGGCCTGCTGCAGCGTGGCCGCGACT TCAGCCACTACGAAGACCTCGACGACCGCTACGACAAGCGCCCAAGCGCCTGGATCGAGCCGAAGGGCGACTGGGGCAAAGGCACTGTCGACCTGGTAGA GATCCCGACCGCGGACGAAACCAACGACAACATCGTGGCGTTCTGGAGCCCGGAAAAGCAGCCTGAGCCAGGCCAGGCGTTCGATTTCGCCTATCGCCTG CACTGGACCATGGACGAAGCTTCCCTGCATTCGCCGGACAGCTCCTGGGTCGAGCAGACCCTGCGCTCTACCGGTGACGTCAAGCAATCCAACCTGATCC GCCAGCCGGACGGCAGCGTGGCCTACCTGGTGGACTTCGAAGGTCCATCCCTGGCGGCATTGCCGGAAGACACCGAGGTGCGCAGCCAGGTCAGCGTCGG CGACAACGCCGAGCTGGTGGAAAACAGCGTGCGCTACAACCCTGAAACCAAGGGCTGGCGCCTGACCCTGCGGATGAAGATCAAGGACCCGAGCAAATCC ACCGAGATGCGTGCGGCCCTGGTCAAGAACGCCACCCCTGTCGAGCCGGCCAAGGCCGTGTCGCCAGCCTCCAGCGCCTCCATTGCCAAGGCCGACAAAG TCGCCGCCAAGCAGCAGGAGAAGAAAGAGGCGGATGCCAAGCAAGCCGAAGCCAAGCCGGCCAAGGACGCCAAGAACCACAAAGACGCCAAGCAGCCTGC TGCTGCCGAGGCGGCCCCAGCCACACCGGAATCTGTCCCGACCGAGCAAGTCCTGACCGAGACCTGGAGCTACCAGTTGCCTGCCGATGAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CTCTCAAGTACAGCCAGAGACTCTTGCCGAGTATCTGGCGCACCTGCCAATGACCGATGAGCAGCGCGCGGAACTCGCGGGCTGCAAGTCCTTCAGTGAA CTGCACGAACGCCTGTCGTCGGCGACGTTCGACGCGCCTGCCGATGCCGCCCAGGCCTCGGTGGGCCGCCGGCTGACCCTGAGTTCCGCCGAGGAGCTGA TCGATGCCGAGATGCTGGCGCTCGACGCCAGCGGTCGCGTGTGCCTCAAGGCCACGCCGCCGATCCGGCGGACCAAGGTGGTTCCCGAGCCCTGGCGCAC CAATATCCTGGTGCGTGGCTGGCGGCGCCTGACCGGGCGCACCAACCCGCCGGCACCGCCGAAGGATGAGCGGGTGCTCCCGGCGGCGCGCTGGCGCACC GTGGGCTCGATCCGTCGCTACATCCTGCTGGTGCTGATGCTCGGCCAGACCATAGTGGCCGGCTGGTACATGAAAGGCATCATGCCGTATCAGGGCTGGT
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Amino Acid Sequence |
>glucan biosynthesis protein G
MIVSPCNAPKLSAKRLRNALVTGSALLCLLSAGQLWAFNLDDVSAKAKDLAGQKYEAPRSNLPNEFREMKFADYQKIRFLPEKAEWAKQKTPFKLSFYHQ GMHFDTPVKINEITTNTVEEIKYDSTRFDFGDLKFDPKATEQLGYAGFRVLYPINKADKQDEIMTMLGASYFRVVGKGHVYGLSARGLAIDTALPSGEEF PRFTEFWIQQPKPTDKHLVIFALLDSPRATGAYRLTLRPGSDTIVDVKARMFLRDKVGKLGIAPLTSMFLFGANQPSKVLNYRRELHDSSGLSIHAGNGE WIWRPLNNPKHLAVSNFSVENPRGFGLLQRGRDFSHYEDLDDRYDKRPSAWIEPKGDWGKGTVDLVEIPTADETNDNIVAFWSPEKQPEPGQAFDFAYRL HWTMDEASLHSPDSSWVEQTLRSTGDVKQSNLIRQPDGSVAYLVDFEGPSLAALPEDTEVRSQVSVGDNAELVENSVRYNPETKGWRLTLRMKIKDPSKS TEMRAALVKNATPVEPAKAVSPASSASIAKADKVAAKQQEKKEADAKQAEAKPAKDAKNHKDAKQPAAAEAAPATPESVPTEQVLTETWSYQLPADE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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