Pseudomonas chlororaphis HT66, M217_RS0123030

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis HT66 contig000040, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCATCGGTTGCCCGGACCGTGGCGCTGATCGATATCGGCGCCACCCTGACCACTCTGAGCGTTGTGCATGAAGGGCAGATCATCTATTCCCGCGAGCAGT TGTTTGGCGGGCATCAGTTGACCGAGCACATCCAGCGTCGTTACAGGCTGTCGAAAGAAGAGGCCGGCCTGGTGAAAAAGCAGGGCGGCCTGCCGGACGA CTACGCCAGTGAGGTTCTGCAACCCTTTCAGGAGGCGGTGGTACAGCAGGTTTCGCGCTCGTTGCAGCTTTTCCAGGCCTCCGGCCCGCAGCGCCAGGTC GATTCCATCCTGTTGGCGGGGGGTAGCGCCTCGGTTCCAGGGCTTGCACCGTTGATCGAGCAACGCCTGAGCTTGCCCGTGCTGATCGCCAACCCCTTCG CTGGCATGAGCATCGGCGGCAAGGTCGATGCCGCGGCCCTGGCCAGCGAGGCCCCGTCCCTGATGATCGCCTGTGGGCTGGCCTTGCGGGGTTTCGACTG
DNA Sequence for Gene
>M217_RS0123030
ATGGCGCGGATCAATCTTCTTCCTTGGCGCGAGGCGCGGCGTGAACAGCGGCGTCGGCACTTTCTCCTGGCCCTGGCGGCAGCTGCGGCGGTGGCCTTGG GCGCACTGTTTGCGGGCGACAGGATCATCGACCGGGCGATCGACAGGCAACTGGCGCGCAACAACCACGTAGGGGCACAGATCACCTTGCTCGATCAGCG AATCGCCAAGATCGGCGAACTGAAGCTGCATCGCGAGCAACTGGTGGAGCGGATGAAGATCATCCAGGACCTGCAAGGCAATCGTTCTACCAGTGCGCGG GTGTTCGACCAGTTGGCCCGCACCCTGCCGGACGGGGTGTATTTCACCGATGTGAGGATGAGCGGGCAGACCCTCTCCATCACTGGGGCGGCCGAATCGA ACCATCGTGTTTCGGACCTGATGCGCAACCTGGACGCCTCCGCCTGGTTCGACGCGCCGAGCCTCACGGAGGTCAAGGCCGCCGGGGCGGACAACGCCGA CCAGGTCAATGTGTTTCAACTGACCGTCCATCAGACCCGGCCCGCCATGGGCGAGGGCGGGCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCTGTCCGGCGGGTGGGCGCAAATGCGCCGGATCGATCTCGGCGAGCTGGAAATGAGCAACATGGGGGCGTGGCCGGCGCTGGTCAAAGGCGTGATCGC GGCGCTGGTCATGCTGCTGGTGCTGGCCCTCGGCTACAACCTGTACCTCAAGGATCTGTTGCTGCAACTCGACCAGCGCCGGGCGGACGAGGCTGTGCTG AAACAGCAGTTCGCCAGCAAGGCGCGCCTGGTGGCCAACCTGGGGCCCTACACCGAACAGATGAAGGCCATGGAAACCGCCTTTGACCTCATGCTGCGTC AGCTGCCCAGCGATACCGAAGTGCCAGGCCTGCTTGAGGACATCAGTCGCACCGGGCTTGGCAGCGGGCTGGAATTCGAAGAGATCAAGTTGTTGCCGGA GCTGGTCCAGCCGTTTTACGTCGAATTGCCAATCCAGATCACGGTCACCGGTGGCTATCACGAGCTGGCGACTTTCGTCAGCGGCGTGGCCGGTTTGCCG
Amino Acid Sequence
>pilus assembly protein PilN
MARINLLPWREARREQRRRHFLLALAAAAAVALGALFAGDRIIDRAIDRQLARNNHVGAQITLLDQRIAKIGELKLHREQLVERMKIIQDLQGNRSTSAR VFDQLARTLPDGVYFTDVRMSGQTLSITGAAESNHRVSDLMRNLDASAWFDAPSLTEVKAAGADNADQVNVFQLTVHQTRPAMGEGGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site