Pseudomonas chlororaphis HT66, M217_RS0122675

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis HT66 contig000040, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGCGGCATTGCTGCTGGCGATGTTGGCGTTCTGGTTTCTCGAACCCTTGGTCCTGGCGCGTGGTGTTTCCTTTCGCCCGCAGATCCTGATGGCCAGCCT GCAGATGATCGCCGAGCACCCATGGACAGGTCTTGGTCTGGGCTCGAGCTATAACGTATCGGCTGAAGGGTTTTCGTTCGATCATGCCCACAACCTGTTC ACCCACATTGCCATTGAACTGGGAGTCCCCGGGCTGCTGCTCTGGATCGTGGCTTGGTTTGCCGTCCTGCGCGAAGCCTGGCGCGCCCGTGAATCGCTTT ATGGTCGGGGCGTCATCGGGATCTGGCTGTTCTCCTTCCTGGCCATGCAGTTCGATGCCGCCAGCCTGACCGGAACCCCTCGCGCCGAATGGTTCATCAG CTGGCTGCCGATCGGTTTGGCTACTGTTTTGGTCTGGGCACGGGGCGGTCACACTGGCTGTGATAAAATCCCGCGTTCCTCCTAAACAGTGAGCTCGACG
DNA Sequence for Gene
>M217_RS0122675
ATGAGTGACGCACCGCCCAAAGCGGAACAGGATTCCAGCCTGAAAATCTATTTCCGGCTGTTGGGGTATGTAAAACCCTACATAGGCATTTTCCTGCTGA GTATCGTGGGCTTCGTGATATTTGCTTCCACCCAGCCGATGCTGGCGGGCATTCTCAAATATTTCGTCGACGGTTTGAGCAATCCCGAAGCGGTGCTCTT CCCTAATGTTCCCTATCTGCGCGACTTGCAGCTATTGATGGCGGTGCCGCTGCTGATCATCCTGATCGCGGCCTGGCAGGGGCTCGGCTCCTTCCTCGGC AACTATTACCTGGCGAAGGTTTCCCTGGGACTGGTGCATGACCTGCGGGTCCAGCTGTTCAACAAGCTGCTGGTCCTGCCGAACCGTTATTTCGATACCC ATAACTCCGGGCATCTGATTTCCCGCATCACCTTCAACGTCACCATGGTTACCGGTGCCGCCACCGACGCCATCAAGGTGGTGATTCGCGAAGGCCTGAC AGTGGTGTTCCTGTTCGTCTACCTGCTGTGGATGAACTGGAAACTGACCCTGGTGATGCTGGCGATCCTGCCGTTGATTGCGGTCATGGTCGGCAGCACC AGCAAGAAATTCCGCAAGCAGAGCAAGAAGATCCAGGTGGCGATGGGCGATGTGACCCACGTGGCCTCCGAGACCATTCAAGGCTATCGCGTGGTGCGCA GCTTCGGTGGCGAAAGCTACGAGCAGCAGCGTTTCGTCGACGCCAGCCAGAGCAACACCGACAAGCAGTTGCGCATGACCAAGACCGGTGCGGTCTACAC GCCGATGCTGCAGTTGGTTATCTACTCCGCCATGGCGGTGCTGATGTTCCTGGTGCTGTTCCTGCGTGGCGATGCCACCGCGGGTGACCTGGTGGCCTAT ATCACCGCGGCAGGCCTGCTGCCCAAGCCGATTCGCCAGCTCTCGGAAGTCAGTTCGACCATCCAGAAAGGCGTGGCGGGCGCGGAAAGCATCTTCGAGC AGCTGGATGTCGAGCCTGAAGTCGATCGGGGCCAGGTCGAGCGTGAGCGTATCGAGGGTCGCCTCGACGTGCGCAACCTGAGCTTCACCTATCCGGGCAC CGACCGTGAAGTGCTGAAGGACATCAGCTTCTCCGCGGCTCCCGGGCAGATGATCGCCTTGGTCGGTCGCTCCGGCAGCGGCAAGTCGACCCTGGCCAGC CTGATTCCGCGCTTCTATCACCACGAAACGGGGCAGATTCTCCTCGATGACGTGGAGATCGAGGATTACCGCCTGCGCAACCTGCGCCGGCATGTGGCCC AGGTGACCCAGCATGTAACCCTGTTCAACGACAGCGTGGCCGCCAACATCGCCTATGGCGACCTGGCCGGGGCGCCGCGGGAAGATATCGAGAAGGCGGC GGCGGATGCCTATGCCATGGACTTCATTTCGCAGCTGCCCGAAGGCCTGGACACCCAGGTCGGCGAGAACGGCGTGCTGCTCTCCGGCGGCCAGCGCCAG CGTCTGGCGATTGCTCGGGCCCTGTTGAAGAATGCGCCGTTGCTGATTCTCGACGAGGCCACCTCGGCCCTGGATACTGAATCCGAGCGGCATATCCAGG CGGCCCTGGACAAGGTGATGAAGGGGCGCACCACCCTGGTGATCGCGCACCGCCTGTCGACCATCGAGAAGGCCGACCTGATTCTGGTCATGGACCAGGG GCGGATCGTCGAGCGCGGCACCCATGTCGACCTGCTGGCGCAGAACGGCTACTACTCGCGCCTGCATGCCATGGGCCTGGACGAGCCAGCTTCCGAAGGC ATTGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTCCTGCACCAGGGTGGGCACTGCCCACCCTGGAACGGCCCCGGCGTGCAATGCGCCGGCGGTCTTTGTATCCCGCCCCTTACAGTCTTGACCAAGCCTA AATAATTCAGCGCCTCCTGCTTGTTATGGTTCCAGCCTCAATCGTCGACTGAATCGAGGGGGCCAACCCCGTCGCGCGGGTACTGGAATGCTGCAACGTT ATCTGTGGAAGTTATTGCCCAAGTCGCAACGGGCGTTTTTGCTTGGGCGCCTGTCTGTGGTGGACCGGCAGGTGGTGAACAAGGCCATGTCCGCCAACGT CCGTTTTCCGGCGCCGTTCCGTCAGCACGGTTGTGTGTTCATCCATGTGCCCAAGTGCGCCGGGAGCAGCCTGTGTTCGGCATTGTTCGACGGCTGGACG CCGGGCCACCTGCCCCTGTACTGGTACGAGCAACAGTTTCCCCAGCAGTTCGCCAGCAGTTTCAAGTTCGCCGTGGTCCGCGATCCCCTGGAGCGGGCCT
Amino Acid Sequence
>lipid transporter ATP-binding/permease
MSDAPPKAEQDSSLKIYFRLLGYVKPYIGIFLLSIVGFVIFASTQPMLAGILKYFVDGLSNPEAVLFPNVPYLRDLQLLMAVPLLIILIAAWQGLGSFLG NYYLAKVSLGLVHDLRVQLFNKLLVLPNRYFDTHNSGHLISRITFNVTMVTGAATDAIKVVIREGLTVVFLFVYLLWMNWKLTLVMLAILPLIAVMVGST SKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGESYEQQRFVDASQSNTDKQLRMTKTGAVYTPMLQLVIYSAMAVLMFLVLFLRGDATAGDLVAY ITAAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDVEPEVDRGQVERERIEGRLDVRNLSFTYPGTDREVLKDISFSAAPGQMIALVGRSGSGKSTLAS LIPRFYHHETGQILLDDVEIEDYRLRNLRRHVAQVTQHVTLFNDSVAANIAYGDLAGAPREDIEKAAADAYAMDFISQLPEGLDTQVGENGVLLSGGQRQ RLAIARALLKNAPLLILDEATSALDTESERHIQAALDKVMKGRTTLVIAHRLSTIEKADLILVMDQGRIVERGTHVDLLAQNGYYSRLHAMGLDEPASEG IA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site