Pseudomonas chlororaphis HT66, M217_RS0122530

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis HT66 contig000040, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCGCATGACCGCGTTCATCTGTGACTACCTGCGCATCATGTCCTCCGGCAACATGGCTCCCCACGAGCTGGAAGGCCTGTTCGACATGGAGCTGTTCAG CCTCAAGGAAGACCTCGAGCATCCGTCCCATGCGGTCAACGGCATCGCCGACGGCATGCCGGGTTTCGGTATCGTCGCGGCGGTACTGGGTATCGTGGTG ACCATGGCGTCCCTGGGCGACGGCGACCAGAAGTCCATCGGCCTGCACGTAGGTGCGGCGCTGGTCGGTACCTTCTTCGGTATTCTCGCGGCCTACGGCT TCTTCGGCCCGCTGGCCCATTCCCTGGCGCATGACGCCAAGGAAGAGCTGAACGTCTACGAAGCCATCAAGGCTTCCCTGGTGGCCTCGGCTTCCGGCAT GCCGCCATCGCTGGCCGTGGAGTTCGGGCGCAAGGTGCTGTACCCGGCGCACCGTCCAAGCTTCGCCGAGCTGGAACAAGCGGTTCGCGGTCGCTAAGCC
DNA Sequence for Gene
>M217_RS0122530
ATGGAAAACAATCAGCCGATTATCATCAAGCGCGTCAAGCGCTTTGCCGGCGGGCATCACGGCGGGGCGTGGAAGATCGCCTTTGCCGACTTCGCCACGG CGATGATGGCGTTCTTCCTGGTGCTGTGGCTGCTGTCCACCGCCACCCCGGAACAGAAGATCGCCATCGCCGGTTACTTCAAGGACCCGATCGGCTTCTC GGAAAGCGGCACGCCCTACATCATCGACCTGGGTGGTTCTCCCGAGCTGGCGCCGGAAAATACGCTCAACCCCGAGATCAAGTCGCAGCCGCAGCCGGAC AAGGTTACGGTCGACACCGATCAGGTCGAGAGCATGGCCGAGCAGGTGGAAAGAGAGCGTCTGGAACTGTTGCTGCAGGAGTTGCAGAACAAGGTCGAAG AAAACCCGCAGTTGCAGAAGTTCAAGGACCAGATCCTGTTCGAGATCACTCCGGACGGCCTGCGTATCCAAATCATCGATTCGGAAAACCGGCCGATGTT CGACTCCGGCAGTGCGCGTCTGAAGCCGTACTTCGAGGACATCCTGCTGGCCATGGCCGACACCATCAAGGCGGTGCCGAACAAGATCAGCATCAGCGGT CACACCGATGCCAAGCCTTACGCGGGCACTGGCGATTTCGGCAACTGGGAGCTTTCGGCCAACCGTGCCAACGCCGCGCGTCGGGCGCTGGTGGCGGGTA GCTATCCGGACGGTCAAGTGGCTCGTGTGGTGGGTTATGCCTCGTCGTCGTTGTTCGATCGCAAGGATCCGTTCAATCCGATCAATCGGCGTATCGACAT CGTGGTGCTGACCAAGAAGGCCCAGCGCGCGATCGAAGGTGAAGTCGCTCCCGAGGCTCCGGCACCGACCCAGGGCCAGGGCGCCCCGGGTGAAGTGCCG GCCGATCCGAACGCCTTGCCGCCGGAGCAGGAGCCTTTGCCGGCTCATGAGCTGCGCGAGCGCCTGAATATCTTCGACGACGCTGCACCGAAGACCGAGG GCGCGGCTGCCCCCGCAGCTACGCCTCCCGCTGCGCGGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGGTAAAAGCAGGCTCTGTTAAAGAGTGCTCGATAAAAAAGGCCGCGATCATCGCGGCCTTTTTTGTTTCTGCGTGGGGCTACTTATTAATAGCTGCTG TCCGGCAGGCTGGCGATGATCGAGCGATAGCTGTTCATCCTTTGCTGTTGGATCCGGCCATCTTCCAGGGCCTTGAGCAGGGCGCAGCCCGGTTCACGGT CATGCTTGCAGTCGCGGAAGCGGCAGGTGCCCAACAGGTCGTTGAACTCGATGAAACCTGCTTCGACATCGGCGCGGCTGACGTGGCCCAGGCCGAATTC GCGAATCCCCGGGGAGTCGATCAGTTCGCCGCCGCCCGGGAAGTGGAACAGGCGCGCGGTGGTGGTGGTGTGGGTGCCCTGGCCGGACAGTTCCGATAAC GGGCCGACGCGGGTTTCGACGTCCGGCAGCAGGCTGTTCACCAGCGACGACTTGCCCACGCCAGACTGGCCGACGAATACGCTGATCCGTCCGTCCAGCT
Amino Acid Sequence
>flagellar motor protein MotB
MENNQPIIIKRVKRFAGGHHGGAWKIAFADFATAMMAFFLVLWLLSTATPEQKIAIAGYFKDPIGFSESGTPYIIDLGGSPELAPENTLNPEIKSQPQPD KVTVDTDQVESMAEQVERERLELLLQELQNKVEENPQLQKFKDQILFEITPDGLRIQIIDSENRPMFDSGSARLKPYFEDILLAMADTIKAVPNKISISG HTDAKPYAGTGDFGNWELSANRANAARRALVAGSYPDGQVARVVGYASSSLFDRKDPFNPINRRIDIVVLTKKAQRAIEGEVAPEAPAPTQGQGAPGEVP ADPNALPPEQEPLPAHELRERLNIFDDAAPKTEGAAAPAATPPAAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site