Strain | Pseudomonas chlororaphis HT66 contig000040, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGTGCCGGGCATAAAAACGCCCCAGGCGCGGCACCAGCCACAGCGCGGCGAAGGCCGGGGTGGTGGAGATCATCAGGTTCGCGCCGCTGCGTTGCGGGC GCAGGCTGTCGACGCTCTGCGCCACTTCCAGCAAGGCGCCGTGCAGGCTGTGGAACAGGCGTTCGCCGCATTCGGTCAAGCGCACCTGGCGCGGCAGGCG CTGGAACAGCGGCACGCCCAGCCAGCTTTCCAGGGAACGGATCTGGTGGGAAATCGCCGTGGGCGTAACCGACAGTTCCTCGGCGGCGGCCTTGAAACTC AGGAGCCGGGACGCCGATTCGAAGGCGCGCAAAGCGGTCAGCGGCAGGTTGGCAAACATAAAGGGTCACCTTATGGATGAAATGGATTCATCCTGATCAA CTATTGCTCATTTGTTCACGGGGGCCGGCATCAATAGTTTTATTCCCACCCAGGAAGGCTTTTACGGTCTTCCGCAATTATCCAGGATGAGGAATGACAG
|
|
DNA Sequence for Gene |
>M217_RS0122235
ATGAGCAGAATTCTAGCAGTACACGGCAGCCCCCGTGGCGAACGCTCCCATTCGCGGCGGCTGACGGAACGCTTTCTCCAGGCCTGGCTCGAGGCCCATC CCCAGGGCCAGCTGACCCGTCGGGAAGTCGGCCGGGCCTCGCTGCCCCATGTCAGTGAGGCCTTCGTCGCCGCGGCGTTTTATCCCGAACCCCAGGCGCG GCCCCTGTCGATGCAGGCCGACCTGGCCTTGAGCGACGAGCTGGTGACTGAGTTGCTGGAGCATGAGCTGCTGGTGATTTCGGCGCCGATGTACAACTTC AGCGTGCCCAGCGGCCTCAAGGCCTGGGTCGACCAGATCGTGCGCCTGGGCCTGACCTTCAATACCGTCCAGGACAACGGCATCGCCCAGTACGAGCCGC TGGTGCGGGGCAAGAAAGCGCTGATCGTCACCAGCCGCGGCGGCTTCGGCTTTGGCCCGGGCGGCGAACTGGAGGCCATGAACCATGCCGACCCATGGTT GCGCACCGCGCTGGGTTTTATCGGTATCGAGGACGTCACGGTGGTCGCGGCGGAAGGCGAGGAATCGGCCGAGCGCACGTTCCAGGTGTCCTGCGCCGAA GCCAAGCAACGCCTGCTGGCGCTGGCGCGGACCTTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GGAGGCGACATGGCCTGGCTGTTCTTGCTGATCGCCGCCGCCTTCGAAGTCACCTTCGCCATGGGCATGAAGTACGCCGAGGGTTTCACCCGGTTGTGGC CGTCGTTGCTGACGGTGGTGGCCGCGCTGGGCGGCATCTACTTCCTGACCCTGGCGATGCGTGAACTGCCGGTGAGCATCGCCTACCCGATCTGGACCGC CATCGGCTCCCTGGGCACGGTGTTCCTCGGTTTTGCCTTGCTGGGGGAGAGCCTGACGCTGGTCAAGCTGGTGTCGGTGGGGCTGATCGTGGCCGGGGTG GTGGGGTTGAAGTAGAAGGGGATGGAACCCGGGGGAATGTCATACAGTGGTCGTGAAGCTGTCATCTTGGCTGTCGATGCTCTTGGCTGCTGTCCTGCAT CCAGCCTTGGGCGCTGATATCCCTGATACAAGTCCGATCACAAGGATGTTCCCATGTCCCAAGAGCTTGCCACGCGTTACCCGCTGGTCCTGGTCCCCGG
|
|
Amino Acid Sequence |
>FMN-dependent NADH-azoreductase
MSRILAVHGSPRGERSHSRRLTERFLQAWLEAHPQGQLTRREVGRASLPHVSEAFVAAAFYPEPQARPLSMQADLALSDELVTELLEHELLVISAPMYNF SVPSGLKAWVDQIVRLGLTFNTVQDNGIAQYEPLVRGKKALIVTSRGGFGFGPGGELEAMNHADPWLRTALGFIGIEDVTVVAAEGEESAERTFQVSCAE AKQRLLALARTF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|