Pseudomonas syringae DSM 10604, PSSR_RS0116455
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae DSM 10604 Contig30, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGCGCTGTTCAGCGGCATGTACCTCAACGAGCTGCTGATTCGCCTGTTGCCTGCCGAAGACCCTCATCCTGCCGTGTTCGAACATTACGCTGCCACGC TGCTGGCCCTTTCTCTGGGGCGTCCACTGGAGCCGTTGCTGCGTTCGTTCGAATGGCGGTTGCTGGATGACTTGGGCTATGGCTTCGCGATGGACGCCGA CATCAACGGCGAACCGCTGGCCATTGATGGCATGTATCGTCTGCAGGTCGATGCCGGGCTCGAGCGTGTGTACTTGCTTCAGCCCGGTCTGTTTCAGGGC GCGGAATTACTGGCCATGTCCGAAGCGGACTGGAGCGTCCCCGGCGCATTGTCCGCTGCCAAGCGCCTGATGCGTCAGGCGCTGGCGGTTCACTTGGGCG GTCGCCCTTTAGTCAGTCGTGAACTGTTTCGCAAGCCGTGATCAGGCTTTATTCTCTACAGCCTGCTTCGACCAGCTCGCCCATTTTTCTGGAGACCACC
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| DNA Sequence for Gene |
>PSSR_RS0116455
GTGACCCACAGCACTCGTATCCTTCTCGGCGTGAACATCGACCACGTAGCCACCTTGCGTCAGGCCCGTGGCACGCGTTACCCGGACCCGGTCAAGGCTG CCCTGGACGCCGAAGAGGCAGGCGCCGACGGCATCACCGTTCACCTGCGTGAGGACCGCCGACACATTCAGGAGCGCGATGTCCTGCTGCTCAAGGACGT CTTGCAGACCCGCATGAATTTCGAGATGGGCGTGACCGAAGAAATGCTCGCCTTCGCCGAACGCATTCGCCCGGCGCACATCTGTCTGGTGCCTGAGACA CGGCAGGAGCTGACCACCGAAGGCGGTCTGGATGTGGCAGGGCAGGAAGCGCGGATCAAGGCGGCGGTCGAGCGACTGGCGAAGATTGGCTGCGAGGTTT CACTGTTCATCGACGCCGACGAGCGTCAGATCGCCGCTTCAAAACGCGTCGGTGCACCCGCCATCGAACTGCACACCGGTCGCTATGCCGATGCTCAGAC CCCGACTGAAGTCGCCGAAGAACTGCAGCGGGTCGCCGATGGTGTCGCGTTTGGTCTCGCCCAAGGGCTGATCGTCAATGCCGGTCATGGCCTGCATTAT CACAACGTCGAAGCGGTCGCCGCGATCAAGGGCATCAACGAACTGAACATCGGCCACGCGCTGGTGGCTCATGCTCTGTTCGTCGGCTTCAAGGCGGCAG TCGCCGAGATGAAGGCGTTGATCGTGGCGGCAGCCAGATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTCGTCCCTCAGGGCTTGCGCCCCACGATCACCGCACGCATGGGGGCAGGCAGGCCCTCGACTGTCTTGCTGTGGTCGGTGGGGTCCAGATAATCGCTCA GGGACTGGAAGCGCATCCACTCGGTGCTGCGTTGTTCGTCGACCGTCGTGTGGCTGACGTCGACGCAACGCACATCGGTGAAGCCGGCACGGCGCATCCA CAACTCCAGAGCAGGCACTGAAGGCAGGAACCAGACGTTGCGCATCTGCGCATAACGATCTTCCGGGACCAGCACCTGATGGACATCACCCGGCACTACC AGGGTTTCCATCACCAGCTCGCCGCCTTTTACCAGACAGTCTTTCAAGGCCAGCAGGTGGTCGATGGGGGATTTGCGGTGATACAGCACGCCCATCGAAA ACACCGTGTCGAAACCTTCCAGGTTGGCGGGCAGGTCTTCCAGCGCGAACGGCAGGTGCCAGGCGGGCAGATCAGGCAGATAGCGCTGCATGGCCTGGAA
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| Amino Acid Sequence |
>pyridoxine 5'-phosphate synthase
MTHSTRILLGVNIDHVATLRQARGTRYPDPVKAALDAEEAGADGITVHLREDRRHIQERDVLLLKDVLQTRMNFEMGVTEEMLAFAERIRPAHICLVPET RQELTTEGGLDVAGQEARIKAAVERLAKIGCEVSLFIDADERQIAASKRVGAPAIELHTGRYADAQTPTEVAEELQRVADGVAFGLAQGLIVNAGHGLHY HNVEAVAAIKGINELNIGHALVAHALFVGFKAAVAEMKALIVAAAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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