Pseudomonas sp. URHB0015, N526_RS0110545

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. URHB0015 N526DRAFT_scaffold00007.7_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGGTGCTGCTCGACGTCTAGGGTTGGACCCAGATGCCGGCGGCGTCTTCGCGGCACTTCAGGGCCGTAAGTGATTGGCCAGCGCAAGGCCCCGCGACGCA TTCACCGCTTTCGATCAGGAACAGTGCGCCGTGGCTGGCGCACTGGATCAGGCTGGCGCTGGCGTCGAGGAACTGGTCCGGGTGCCACTCCAGGCTGATG CCGCGATGCGGACAACGGTTTTCATAGGCGTAGATCTGTCCTTCACGGCGCACGGCGAAGACGTTCTTCTCGCCAATCTTAAAGCCGCGACTGCTGGTAT CAGCCAGTTCCGCGCTGCTGCAAAGAAACTTCATGTCTATCCTCAAGTGCCGAAGGCGTGGGCCAATGGCGAGTGCGCTGGTTAGCAAATGTGTCTGTGC TTGACGTTCAAATGCTAACAATTATCAAATGCCGGATTCGCCCGGGCGTACAAACGACGCCGGTCATTGTGTGGGAAATCTCCTTAAAGGAAACCCTGTT
DNA Sequence for Gene
>N526_RS0110545
ATGCGCCTGAGTACCAGCGCTATTGCGCTCTGTGTCGGACTTCTGGTCAATCATGTGGCCGCAGCCGCCGAATTGCCGCAACGCTGGGTCAGTGCCGGGG GCGCGCTGTCGGAATGGGTCAGCGCCCTGGGCGGCGAATCTAAACTGGTGGGCGTCGATACTACGAGCCAGCACCCTGAATCGATTAAGGCCTTGCCGAG CATTGGTTATCAACGACAACTCTCGGCTGAAGGCGTATTGAGTTTGCGCCCGCAAATTCTGATCGGCACCGAAGAAATGGGCCCGCCGCCCGTGGTATCG CAGATTCGTACCGCAGGAGTTCAGGTCGAGTTGTTCTCGGCGCAAGCGGACCTGCCAACCCTGGAAAACACCCTGAAGCACTTGGGCCGTTTGCTCGGTA ACGAGGCGCAGGCCACGACCCTGTTCCAGCGTTATCAACAGCAACTCGAGGAGCGCAAGGCCTGGGTCAGTCAGGCTCAGGCTCGTCAGAAAGCCCCAGG TGTCCTGCTATTGCTGGGTCACGCCGGAGGTAAGCCATTGATTGCTGGCAAGGACACCGCTGCCGATTGGCTACTGCAGCAGGCGGGTGGTCATAACCTG GCAACCCACAGCGGCTACAAGCCGTTCTCCGTCGAATCCCTGGCCGGTTTGGCGCCGGATGTGCTGGTGTTTTCCGACCGGGCGCTGACCGGCGATGCCG CGCGCGCGGCGTTGTTCAAACAGAATCCGATCCTCGCCTCGACGCCAGCGGCCAAGGCAGGGCGGGTGCTGGAGCTGGATCCGACATTGTTGGTTGGTGG ACTTGGACCGCGACTGCCGCAGAGCCTGGTCAAGCTGTCTGCAGGCTTCTATCCGGCTGAGCCCGTCAAGGCCGCCGTCACTCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCACTCTGGTGAAACCACGTTCGCTGTTTATCGGGCTCAGCCTGCTGTGGTTGCTGGCGATCTGGTTATCGCTGGCTCTCGGCCCGGTCAGCCTACCGCT GATGGACACGATGCGTGCGGCCTTGCGCCTGCTGGGTCTGCCGATTGCCGCTCAAGGCCTGGAACAGGCGGAATTGATCCTTGGCCAGATTCGCCTGCCG CGCACCTTGCTCGGGCTGGCGGTCGGCGGCGTGTTGGCGCTTTCCGGCGTGGCCATGCAGGGGCTGTTTCGTAACCCGCTGGCGGATCCCGGTCTGGTGG GTGTATCCAGTGGCGCAGCCTTGGGTGCAGCCATTGCGATTGTCGGTGGCTCGTTGTTGGGTGGCCTGCCTGAGGCGCTCGGCCCCTATCTACTGTCGAT CTGTGCTTTCCTTGGTGGCCTGGCAGTGACGGCGCTGGTCTATCGATTGGGGCGGCGCAACGGCCAGACCAACGTTGCAACGATGTTGCTTGCAGGCATC
Amino Acid Sequence
>ABC transporter substrate-binding protein
MRLSTSAIALCVGLLVNHVAAAAELPQRWVSAGGALSEWVSALGGESKLVGVDTTSQHPESIKALPSIGYQRQLSAEGVLSLRPQILIGTEEMGPPPVVS QIRTAGVQVELFSAQADLPTLENTLKHLGRLLGNEAQATTLFQRYQQQLEERKAWVSQAQARQKAPGVLLLLGHAGGKPLIAGKDTAADWLLQQAGGHNL ATHSGYKPFSVESLAGLAPDVLVFSDRALTGDAARAALFKQNPILASTPAAKAGRVLELDPTLLVGGLGPRLPQSLVKLSAGFYPAEPVKAAVTQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site