Pseudomonas sp. URHB0015, N526_RS0110155

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. URHB0015 N526DRAFT_scaffold00007.7_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCGATGTTCAGTTCCGGCATCGGGCGCGCTTCGCCCTCGAACTCAGTGTCGACGCCAGCCATGATTTTCAGCAGCGTGGACTTACCCGAACCGTTGAGG CCGAGTACGCCGATCTTCGCGCCAGGGAAGAACGACAGAGAAATATTTTTGAGGATTTCCCGCTTCGGCGGAACAACTTTGCCCAGCCGATGCATGGTGA AGACGTATTGAGCCAAAATGTGCACCTAGCGTCAGTAACGATTGAATAAAGCGGGTCAAGCCCGTGCAGGCCATGCGCGGCGCGGGCATGGACCGGGGTC AATGCCTGCTTGCGGTAAAAAAGCCTGAATTTCTGGGGCTGGAACGCCCTGCGTAACCGGCAAAGCTACCTCAATGCAGCATACCCGTCCAGCCGCGCAG GGCTGGCACTTTGCCACAACTCAAGGCATGCTAGCCGCCCTACGGGCGTCAGGCTTATAGTGCACGTCGCGCCAGTCCAGCCACACCGCAGGATTAGAGA
DNA Sequence for Gene
>N526_RS0110155
TTGTCCAATGCCACCCCGCCATCCTTCCCGCGCGTGCAAAACACTGTGAGCGGATCGCCCCTGCGCGGTTCCCTGAAGGGCGCGCTGGCGATGCTGGTAT TGCTATTGCTCGGATTGTTGTTCTGGCAGTTGCTGGATCAACTGCGCGAAACCCAGAAAAACCAACGCCAGTACACCATCGATTACACCGCTGATCTGGC GGCGCAGGTCAGCTTGAACATGGCGCTGAATGCGCAGATTGCCCTGAATCTGCTACCAATCGTCGAACAACCTCAATCCGCCGACCAACAGCAACTCCTG CTGCGCAAGCTTCAGCAGTCTTTGCCGGATGTGCTCAGCGTGGCCCTGCTCAGCCCCTCGGGCAAGGTGCTCGGCGACAGCGCCGCTGACAGCAGCGACG CCGCTTATCTGAGTGAGCTGGTACAGCGCAGTCGCGCCCAGGCGCACTACTTCAGCAACGCCAATGACGGCTCAGTGGTGCACCTGTTGCTACACCAGGC CAGCGGTAACACGCGCGGCTATTGGGCGCTGCGCCTGCGACCGACGTTTTTCTCGTCGTTGACCAAGCAAGGCGACATGGCAATACGCCCGCTGTGGCTT GTGGAAAACCACATCACTCAGCAAATCATCAGTCGCGACGACCTGCTGCCCGCTGCACAGCCAAGCCGGCTGACTGCCGAAGACCAGACCAATACGGTGT TGACGGTCCCCTTGAGCAATAGTGACTGGCAACTGCGCGGCCTGTTCGACCGGCAACGGGTCATCGAACAGTTGCTGCCAGCCTTTGTTGGCAAATGCCT GCTGGGGCTGGCCCTCTCCCTGGTGCCCTTCATCGCCTTGCTGAATATGCGCCGCCGGCAACGTCAGCTACTCGAGGGTCGCCGACGCTACCAGGATATT TTCGACGGCACCGGCGTGGCGCTGTGCGTGATGGATCTTTCGGGCCTCAGGAGCGCTTTCGAAAGAGCCCGCCTGCAGAATCTCGAGCAATTGCGTGCCT GCCTGGATAACTCCGCGCAACGCCAGCAACTGTTGCAGGAGCTACGCATTACCGAGGTCAATCAGGTCGCTCTGCACCTGCTCGGCGTCCAGTCGAGCGA GCACGCCTGGAAATTGCTGATCGAAGGCACTCCGCTGGATGACAACAGCATCGGCAACCTCCTGCTCGAGGCCGTGTTTACACAACAGAGCACCCTCGAA ACCGAGATCAAGCTCAAGGATCGCGACGGCCGTGAACAGCATCTGTGGCTGGTGGTGCGCTTGCCCCATGAGCAGCATGATTTCCGCGCGGTGATCCTGA GCATCAATGACATCACCAGCCGTAAGCTGGTCGAACTGTCGCTGCTGGAACGCGAAGGCTTCTGGTCCGATGTGGTGCGCACGGTGCCTGATCATCTTTA TGTACAGGACGTGATCAGCCAGCGGATGATTTTCAGCAACCATCATCTGGGCCAGACCCTCGGCTACAACAAGACCGAACTGCACCAGATGGGTGAGTAT TTCTGGGAAATCCTCCTGCATCCCGAGGATGCCGAGCTTTACCATCGCATGCGCCAGGAGCAGCGCCAGACCGGTTATCGGCAACTGATGCAATGTCAGC TGCGTTTTCGCCACCGTGACGGCAAATGGCGTTGCTTCGACATCCGCGAACAGGCATTGGCCCGCGACCCGCACGAGCAGGTCACGCGCATCATCGGCGT GGCCAAGGACGTGACCGACCAGATCGCCGCCAGCGAATCCTTGCGCGACAGCGAGCAGCGCTACCGCATGCTCGCCGAAAGCATCAGTGACGTGATCATC TCCACCAACAGCAGGCTCTCGCTCAACTACGTCAGCCCCTCGGCGCAGGCCGTGCTCGGCTATGACGCTGACTGGATTTTCCATAACGGCTGGCAGTCGA TCGTCGCCAATCCGCAACAACTGACCGGCATCTACAGCCTCATGGACCGGGTCAGCAAAGCCCTGAACAATCCGGAGCAACTGGCGCAATTACGCAGCCA GGTGCAGACCCAACTGTTCCTGTTCGATTGTCTGCGCGCCGACGGCCGCAAGATCCCTATCGAGCTGCGGCTGGTGCTGGTGTGGGACGACGCCGGAACC TTTGAAGGCGTACTGGGCGTCGGTCGCGATATCAGCCAACAGCGGCGCGCCGAAAAAGACCTGCGCATGGCCGCCACGGTGTTTGAACACTCAACGTCGG CGATCCTCATCACCGACCCAGCCGGCTATATCGTCCAAGCCAACGAGGCCTTCAGTCGCGTCAGTGGCTACGAGGTTGCCCAGGTCCTCGACCAATTGCC GAACATGCTCACCGTCGACGAACAACAGGAAGCCCACCTGCGTTATGTGCTCAAGCAATTGCACCAGCACAACACCTGGGAGGGCGAAGTCTGGCTTAAG CGGCGCAGTGGCGAACACTATCCGGCCTGGGTCGGTATCACGGCAGTGCTCGACGACGAGGGCGACCTCGCCAGCTATGTGTGCTTCTTCAGTGACATCA GCGAACGCAAGGCCAGCGAGCAACGGATTCACCGACTCGCCTACTACGATGCCCTGACTCACCTGCCCAATCGCACGCTGTTCCAGGATCGCCTGCACAC CGCCTTGCAAACGGCGCAGCGGCAGAAGTCCTGGGTGGTGCTGATGTTCCTCGACCTCGACCGCTTCAAACCGATCAATGACTCGCTGGGGCATGCCGCC GGCGATCGAATGCTCAAGGACATGGCCACTCGCCTGCTTGGATGTGTCGACGACGATGACACGGTAGCCCGCATGGGTGGCGACGAGTTCACCCTGTTGC TGCAACCGCGCGCCACCCGTGAACAAGCCCTGAACCGGGCGATAAACGTGGCTGAGCAAATATTGGCCAGCCTGGTCAGGCCCTTCGTCCTCGAAGCCCG CGAATTCTTCGTTACCGCCAGCATTGGCATTGCCCTGAGCCCGCAGGACGGCAACGAGCTCAGCCAGCTGATGAAGAACGCCGACACGGCGATGTACCAC GCCAAGGAGCGCGGCAAGAACAACTTCCAGTTCTACCAGGCCGACATGAACGCCAGCGCCCTAGAACGCCTGGAGCTGGAAAGCGACCTGCGCCATGCTC TCGAGCAGAATGAATTCGTCCTGTACTACCAGCCGCAATTCAGCGGCGACGGCAAACGCCTGACCGGCACCGAGGCCTTGCTGCGCTGGCGCCACCCGCG ACGCGGACTGGTGCCGCCAGGGGATTTCATTCCGGTGCTGGAAGAGTTGGGGCTGGTGGTGGATGTCGGCGACTGGGTCATCAGTGAGGCCTGCCGTCAA CTCAAGACCTGGCACCAGGCCGGTGTGCGCGTGCCAAAGGTCTCGGTGAACATTTCTACCCGGCAGTTCTCCGATGGTCAGCTCGGCAACCGCATCGCCA ATATCCTCAGGGACATCGGCCTGCCGCCGGCCTGCCTGGAACTGGAATTGACCGAAAGCATCCTGATGCGCGAAGTCAGCGAGGCCATGCAGATCCTCGC TGGCCTGAAAAACCTCGGCCTGAGTATCGCGGTCGACGACTTCGGCACCGGCTACTCCTCGCTCAACTACCTCAAGCAGTTCCCGATCGACGTGCTGAAA ATCGACCGCACCTTCGTCGATGGCCTGCCGTCCGGCGAGCAAGACGCGCAAATTGCCCGGGCAATCATTGCCATGGCCCACAGCCTGAACCTGGCGGTGA TCGCTGAAGGCGTGGAAACCCACGAACAACTGGAGTTTCTGCGCGAGCACGATTGCGATGAAGTGCAGGGGTATCTGTTCGGGCGGCCAATGCCGGCCGC GCGCTTCGAGGCGCAGTTCAGCAATGATGCGCTCTTCGTTTTCGAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGCTGCTCAATCCCCCCTGTGGGAGCGGGTTTGCCCGCGATGACGACAGCACAATCACCGCCGATCCCGGCATGAACGCCACTTGTCTGCGACTTGATG TCCTTTCATATGCCAGACAAAAGCCATTGAGTTAGAATGCCTCCCTTTTCCGCCCCCCCGATCCTTGAGGACCGCCATGTTCAGCCGTGATTTGACTATT GCCAAGTACGACGCCGATCTTTTTGCCGCCATGGAGCAAGAAGCTCAGCGCCAGGAAGAACACATCGAGCTGATCGCTTCGGAAAACTACACCAGCCCAG CGGTCATGGAAGCTCAGGGCTCGGTTCTGACCAACAAGTACGCCGAAGGCTATCCGGGCAAGCGCTACTACGGCGGTTGCGAGTACGTCGACGTCGTTGA GCAACTGGCTATCGACCGTGCCAAAGAACTGTTCGGTGCCGATTACGCCAACGTTCAACCGCACGCCGGTTCCCAGGCCAACAGCGCCGTTTACCTGGCC
Amino Acid Sequence
>diguanylate phosphodiesterase
MSNATPPSFPRVQNTVSGSPLRGSLKGALAMLVLLLLGLLFWQLLDQLRETQKNQRQYTIDYTADLAAQVSLNMALNAQIALNLLPIVEQPQSADQQQLL LRKLQQSLPDVLSVALLSPSGKVLGDSAADSSDAAYLSELVQRSRAQAHYFSNANDGSVVHLLLHQASGNTRGYWALRLRPTFFSSLTKQGDMAIRPLWL VENHITQQIISRDDLLPAAQPSRLTAEDQTNTVLTVPLSNSDWQLRGLFDRQRVIEQLLPAFVGKCLLGLALSLVPFIALLNMRRRQRQLLEGRRRYQDI FDGTGVALCVMDLSGLRSAFERARLQNLEQLRACLDNSAQRQQLLQELRITEVNQVALHLLGVQSSEHAWKLLIEGTPLDDNSIGNLLLEAVFTQQSTLE TEIKLKDRDGREQHLWLVVRLPHEQHDFRAVILSINDITSRKLVELSLLEREGFWSDVVRTVPDHLYVQDVISQRMIFSNHHLGQTLGYNKTELHQMGEY FWEILLHPEDAELYHRMRQEQRQTGYRQLMQCQLRFRHRDGKWRCFDIREQALARDPHEQVTRIIGVAKDVTDQIAASESLRDSEQRYRMLAESISDVII STNSRLSLNYVSPSAQAVLGYDADWIFHNGWQSIVANPQQLTGIYSLMDRVSKALNNPEQLAQLRSQVQTQLFLFDCLRADGRKIPIELRLVLVWDDAGT FEGVLGVGRDISQQRRAEKDLRMAATVFEHSTSAILITDPAGYIVQANEAFSRVSGYEVAQVLDQLPNMLTVDEQQEAHLRYVLKQLHQHNTWEGEVWLK RRSGEHYPAWVGITAVLDDEGDLASYVCFFSDISERKASEQRIHRLAYYDALTHLPNRTLFQDRLHTALQTAQRQKSWVVLMFLDLDRFKPINDSLGHAA GDRMLKDMATRLLGCVDDDDTVARMGGDEFTLLLQPRATREQALNRAINVAEQILASLVRPFVLEAREFFVTASIGIALSPQDGNELSQLMKNADTAMYH AKERGKNNFQFYQADMNASALERLELESDLRHALEQNEFVLYYQPQFSGDGKRLTGTEALLRWRHPRRGLVPPGDFIPVLEELGLVVDVGDWVISEACRQ LKTWHQAGVRVPKVSVNISTRQFSDGQLGNRIANILRDIGLPPACLELELTESILMREVSEAMQILAGLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLK IDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLEFLREHDCDEVQGYLFGRPMPAARFEAQFSNDALFVFE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site