Pseudomonas umsongensis UNC430CL58Col, N519_RS0119715
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas umsongensis UNC430CL58Col N519DRAFT_scaffold00018.18_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TACAGCGAACGCTCGCTGCTGTATTGCGCGGTCGGCCATCCGCTGTTCTATGTCGACGACAAACAACTGGACGATGAGCGCCTCAACAGCCAGGACGCCA TCGCCCCGACCTTCCGTTTGCCCGCCGAGATTCAGGCCCATTACCAGGCGCTCAATTGCACCGCCAGTGCGTCGGATCGCGAGGGCATGGCCTTTCTGAT CCTGACCGGGCGCTACATTGGTTACCTGCCGGATCACTACGCCAGCCTCTGGGTGCAGCAAGGCCGTTTGCGTGCACTGAAACCCAAGGCACGTTTTTAT GACCTGAGCCTGGCATCGGTTACACGCAAGGGCCGTCGTCCGCATCTGGTTCTGGAGAGCTTTCTGGAGAGTCTGGCGGCGACTCGCTGAAAGCTTGTGG GAGCGGTGCCCAAGGTTTTATCGCCATAGGACTTGTCTGAGGCCCGTGGGTGCGCTATCAACGCATCTGGTTGCACCCATCTACCTGTTCGGAAGTGCCT
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| DNA Sequence for Gene |
>N519_RS0119715
ATGACCTTTGAAGTCCCAGCCCACGGCGGCAAACCCGCCGGCCGCATTCGTCAGAAGAACGAAGAGACCATCATCAAAGCCGCCGAAGACGAGTTCGCCC GTCACGGGTTCAAAGGCACCAGCATGAACACCATTGCGCAGAAAGCCGGGTTGCCCAAAGCGAATCTGCATTACTACTTCACCAACAAACTCGGTTTGTA CGTGGCGGTGCTGAGTAACATCCTTGAGTTGTGGGACAGCACCTTCAATACCCTGACCGTCGAGGACGATCCGGCTGAAGCGTTGACGCGATACATTCGC GCAAAGATGGAATTCTCCCGGCGCCAGCCACAAGCTTCGCGGGTCTTCGCCATGGAGGTCATCAGCGGCGGTGATTGCCTGACTGAGCATTTCAACCAGG ACTACCGCACCTGGTTTCAAGGTCGGGCCGCGGTGTTCCAGGCGTGGATCGACGCCGGCAAAATGGACCCGATCGACCCGGTGCACCTGATTTTCCTGCT GTGGGGCAGCACCCAGCATTACGCGGACTTTGCCACGCAGATCTGCCGTGTCACCGGGCGCACCAAGTTGACCAAGCAAGACATGGAAGACGCCGGCAGC AACCTGATTCGCATCATTCTCAAAGGCTGCGGCCTGACGCCGGCTATTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GACACCCATGCCTTTTACCCTCAGCGGTTTTTGCGAATACCGCGAAGAGATTCGCAAAAGCCGCTTCATCGCCCTCGCCGCGCCGATCGCCAGCGCAGCC GATGCCCAGGCGTTCATCGAGCAGCACAGTGATTTGAACGCTTCGCACAATTGCTGGGCCTGGAAGCTCGGCGATCAATACCGCAGCACTGACGATGGCG AACCCGGTGGCACCGCTGGCCGGCCGATCCTTGCGGCGATTGAAGCGCAGGATTGCGATCAGGTCGCGGTCGTAGTGATCCGCTGGTATGGCGGCATCCA GCTGGGCACCGGCGGCCTCGCCCGAGCGTATGGCGGCAGTGCCAACAAATGCCTGCAAGGGGCGCCGAAAGTCGAGTTGATCAGTCGGGTGCCGGTCCGT TGTGCCTGTGCATTTGGCGAGTTGGCGCTAGTGAAACTTCGGGTGGCGGAGCTGGGTGGTTTGGTGGTGGAGGAAACCTTCACGGCCAATGGTGTGGAAC
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| Amino Acid Sequence |
>TetR family transcriptional regulator
MTFEVPAHGGKPAGRIRQKNEETIIKAAEDEFARHGFKGTSMNTIAQKAGLPKANLHYYFTNKLGLYVAVLSNILELWDSTFNTLTVEDDPAEALTRYIR AKMEFSRRQPQASRVFAMEVISGGDCLTEHFNQDYRTWFQGRAAVFQAWIDAGKMDPIDPVHLIFLLWGSTQHYADFATQICRVTGRTKLTKQDMEDAGS NLIRIILKGCGLTPAI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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