Strain | Pseudomonas aeruginosa PA1R, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TGGCGACCGAGCCGGGAGCGGTATGGGTCGAGACCGTGCGCCGCAGTACCTGCTCGTCCTGCTCGGCCAATGCCGGTTGCGGCCAGGGGCTGATGCAGCG CCTGGGCGTCGGCGCGGGGCGTGCCCGGGTGCGCGCGTTGAGCGACCTGAGCCTGCGGGTCGGCGATGCGGTCGTCCTAGGAATTCATGAAGACCTGTTG TTGCGCGCCTCCGTCCTCTTCTATCTTTTCCCTCTGCTCGGGTTTTTCGTGGCAGCATTGCTGGCGACCCGGGCGGGCCTTGTCGAACCTCTGATCATCG TGTCCGGGCTGGCGGGTTTGCTGGCGGCCTGGCTATTGGTGCGTCGGCATGCTCGTCGTCATGCCGATGATCCAGCCTCGCAGCCGGTGGTTCTGCGAGC GCTGATTTCCGGGCCGTCCGATTCGGCCTGAGTCTTTCTCTTCCCTCGAACATCACGGGAGCTGTAGTCGATGCATACCCTAAAACGCTGTATGGCTGCG
|
|
DNA Sequence for Gene |
>PA1R_gp4259
ATGGTGGCCTTGCTGGCCTTGAGCCTGGCGATGACGGCCCGGGCAGAACTGCCGGACTTCACGCCTTTGGTCGAACAGGCGTCGCCGGCGGTGGTGAATA TCAGTACGCGGCAGAAGCTGCCGGATCGCGCCATGGCGCGCGGGCAGCTGTCGATCCCCGACCTCGAAGGGCTGCCGCCGATGTTCCGCGACTTCCTCGA GCGCAGCATCCCGCAGGTTCCGCGCAATCCGCGCGGCCAGCAGCGCGAGGCGCAATCGCTGGGCTCCGGCTTCATCATCTCCAACGACGGCTACATCCTC ACCAACAATCACGTCGTGGCCGATGCCGACGAGATCCTGGTGCGCCTGTCCGACCGTAGCGAGCACAAGGCCAAGCTGGTCGGCGCGGACCCGCGCAGCG ACGTGGCGGTGCTGAAGATCGAGGCGAAGAACCTGCCGACCCTGAAACTGGGCGATTCGAACAAGCTGAAAGTGGGCGAATGGGTCCTGGCCATCGGTTC GCCGTTCGGCTTCGATCACTCGGTCACCGCCGGTATCGTCAGTGCCAAGGGGCGTAGCCTGCCGAACGAGAGCTACGTACCCTTCATCCAGACCGACGTG GCGATCAACCCGGGCAACTCCGGCGGTCCGCTGCTGAACCTGGAGGGCGAAGTGGTCGGCATCAACTCGCAGATCTTCACCCGTTCCGGCGGCTTCATGG GCCTGTCCTTCGCCATCCCGATCGATGTCGCGCTGAACGTCGCCGACCAGTTGAAGAAAGCCGGCAAGGTCAGCCGCGGCTGGCTGGGTGTGGTGATCCA GGAAGTGAACAAGGATCTCGCCGAGTCCTTCGGCCTCGACAAGCCGTCCGGCGCGCTGGTGGCGCAGCTGGTGGAAGACGGTCCGGCGGCCAAGGGCGGC CTGCAGGTGGGCGATGTGATCCTCAGCCTGAACGGCCAGTCGATCAACGAGTCCGCCGACCTGCCGCACCTGGTGGGCAACATGAAGCCGGGCGACAAGA TCAACCTGGACGTGATTCGCAACGGCCAGCGCAAGTCCTTGAGCATGGCGGTAGGCAGCCTTCCGGACGACGACGAGGAAATCGCCTCGATGGGCGCTCC GGGCGCCGAGCGCAGCAGCAACCGCCTGGGCGTGACCGTCGCCGACCTGACCGCCGAGCAGCGCAAGAGCCTGGATATCCAGGGCGGCGTGGTGATCAAG GAAGTCCAGGACGGTCCGGCCGCGGTCATCGGCCTGCGTCCGGGCGATGTCATCACCCACCTGGACAACAAGGCGGTGACCTCGACCAAGATCTTCGCCG ACGTGGCCAAGGCCCTGCCGAAGAACCGTTCGGTTTCGATGCGGGTACTGCGCCAGGGGCGCGCCAGCTTCATCACCTTCAAGCTGGCCGAATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCCGGCTGGCGAAAAAAGGGCGGTTTCCACCGCCCTTTTTCATGCCCGTCAATCCGTTACCTGCGTGACGCCTTGCCCGAGCATCAGGTAAACTCCCCGG CTATTTTTCGGCGGATTGCCGCCCTTGCCCTTTTCGAGTGTGTTGAGCCGTGAGCGACCTGAGCCATATCCGCAATTTCTCCATCATTGCCCATATCGAC CATGGCAAGTCGACGCTGGCCGATCGCTTCATCCAGATGTGCGGCGGTCTCTCCGATCGCGAAATGGAGGCCCAGGTCCTGGACTCCATGGACCTGGAGC GCGAGCGCGGGATCACCATCAAGGCCCACAGCGTGACCCTGCACTACAAGGCGCAGGACGGTAAGACCTACCAGCTCAACTTCATCGATACCCCCGGCCA CGTCGACTTCACCTACGAAGTCAGCCGCTCGCTGGCCGCCTGCGAGGGCGCGCTGCTGGTAGTGGACGCCGGCCAGGGCGTCGAGGCGCAGTCCGTCGCC
|
|
Amino Acid Sequence |
>HtrA protease/chaperone protein
MVALLALSLAMTARAELPDFTPLVEQASPAVVNISTRQKLPDRAMARGQLSIPDLEGLPPMFRDFLERSIPQVPRNPRGQQREAQSLGSGFIISNDGYIL TNNHVVADADEILVRLSDRSEHKAKLVGADPRSDVAVLKIEAKNLPTLKLGDSNKLKVGEWVLAIGSPFGFDHSVTAGIVSAKGRSLPNESYVPFIQTDV AINPGNSGGPLLNLEGEVVGINSQIFTRSGGFMGLSFAIPIDVALNVADQLKKAGKVSRGWLGVVIQEVNKDLAESFGLDKPSGALVAQLVEDGPAAKGG LQVGDVILSLNGQSINESADLPHLVGNMKPGDKINLDVIRNGQRKSLSMAVGSLPDDDEEIASMGAPGAERSSNRLGVTVADLTAEQRKSLDIQGGVVIK EVQDGPAAVIGLRPGDVITHLDNKAVTSTKIFADVAKALPKNRSVSMRVLRQGRASFITFKLAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|