Pseudomonas aeruginosa PA1R, PA1R_gp3595
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PA1R, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CATCGCCCATCTGGCGCTCGGGTTGGCCCTGGGCGATGCGTTCGAGTTCGAGGAACGCGGCGTCGTACTCCAGATCGTCGCCACAGGGCGAGTCCGGGGA TACGGCAGCCAGCAAAACGGGTACATCCAGCACGGTGACGATCTCCCTATCATCGAAGCCGCTGCGCGGCCCTCACCTTCGCTTGTAAGATCCACTCCGT CGGATCTTGTAGGAGCCATTGATGAATATCGGATGACTCGAAAGGTTGGCAAAATTCTTGTGGCATGCCGCAAGGCTTGTCAAGGAAGGCACAACGCCAC TAGTTGCATGACACCGCAGATCGGACAAATCTTTAAAAGACGTAGGATTAGTCTTTTATAATCCGGTACCACCCGATGTGTCTTCCCGAGGCGACGAAAC GCCGGAAAGCCGTCGGGCCAGCCTGGATGCGAACCGAAATCCCTCGGGCACGGGGGTGAGCGCCTGGAAGAGCCGGGCGCTGGCAATGCAAGGAGTAGCA
|
|
| DNA Sequence for Gene |
>PA1R_gp3595
ATGCCGCTGCGATTGACCATCACCAGCTACCACAAGCTGACCCCCGGTCAGTGTTCGGAAAAGGTACTGGACCAGGGACAGCTGACCATCGGTCGGGGCC CGGACAACGACTGGGTCCTGCCGGACCCGGAGCGCCTGGTCTCCAGCCGCCACTGCACCATCCTCAACCGCGACGGGGTGTACTACCTCACCGACACCAG CACCAACGGCGTGCTGCTGGTCAATGCCGGGCACCGCCTGCGCCGCGGCAACAGCGAGCCGCTGCAGGACGGCGAGACCGTCCGCCTCGGCGAATACGAC ATCCTCGTCCAGCTCGGCCATGACATCGCCCTGCCCGGCAGCGGCAATCCGCAGACCGATCCGTTCACCAGCTTCGACGCCCTGATGAGCCGGCAGGCCG CCGGATCGGCGCCTGCCTTCGCCGAACCGGCGCCCACCCCGCACCCCGCGGTGACGGCGCATTTCCAGGGCGGCTCGCCGCTGGACACCAAGCCCGACCT GTTCGACTTCCTCACCCCGCCGCCGCCCGGCGCGGCGCCGCGTCCGGACCATGTACCGGCCGAACAGCACGACTTCCGCCCGCCGGAACCGGTGATCCCG CCGCCCCCCGCGACCACCCCGGCGCCACCGCCCGCTGGCGGCGCACCGCTGATTCCGGCCGACTGGGACCCGTTCGCCGAACTGCTCGGCAACACGCCCG CGCCAAGCGCCACGCCCGTCGCCCAGCCGCTGCCGACGGCCGAACCGACGCCGCTGGCGATGCCCTTCGCCGACCCAGGGATCACCCAACAGCCACAGCC ACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCACAGCCAGCGAGCGTGGCGGCGCCGACGCCGCCGGCAAGCGCCGCCGCGTCG GCCGGCGGCGACCTGCTGCAAGCGTTCCTGCGCGGCGCCGGCATGACCCAGTTGAAGGTCGACCCGGCCGGCGCCGAAGCGCAGATGGAAGCCATCGGCC GCAGCTATCGCGGCCTGGTGGAAGGACTGGTGGACGTGCTGCGCGCGCGGGCCAGCCTGAAGGGCGAGTTCCGCATGGCGCAGACCATGATCCAGCCGGT GCAGAACAACCCGCTGAAGTTCGCGCCGAACGTCGACGAGGCCATGCTGCTCCTGCTGCGCCGCGACAACCAGGCGTTCATGGCGCCGGATCGCGCGGTG GCCGACAGCTTCGAAGACCTCAAGGCGCACCAGCTGGCGGTGATGGCCGGCGTGCAGGCCGCCATCCGCCACCTGCTGGCGCGCTTCGAACCGGCCGCGC TGGAAGCCCGCTTCGGCAAGCCGGCCGGGCTTTCCGGCCTGCTGCCGGGGGCCCGCCAGGCACAGAACTGGGACAGTTTCACCGAGCTGTACGCGAAGAT CCTGCGCGAGGCGGAGGACGACTTCCAGGAGCTTTTCGGCCGCGAATTCAGCCGCGCCTACGAGGAACACAGCGCTCGACTACGGCGTTCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CGCCAACGAACACCAGGAGAAACAACGTCAATGAGGACGACACCATGCAGAAACTGATCGTCGCGCTGTTCGGGCTGCTGCTCGCCGCCTGTTCGTCCAG CCCGCCGGAAACCCCGCCGACCCGGGTGGTGATCTGGCTCCACGCCGCACCGAACCTCAACCCGTCCGCCGCCGGCCAGGCGGCGCCGCTGCGCCTGCGG CTGTACGAGCTGAAGAAAGACACCGCGTTCGGCCGCGCCGACTACTTCGCCCTCACCGACAACGCCCAGTCGACCCTCGGTGGCGACCTGGTGGAGCAGG ACGAGTTCCTCCTGCGTCCGGGCGAGGAACGGCGCATCGAACGCACGCTCGACGAGCAGACCCGCCAGCTCGGTTTCGTCGCCGCCTACCGCGACCTCGA CCGCGCCACCTGGCGCCAGGTCCTCGACGTGCCGGGGCAACGCACCAGCCATCTCGACATCACGCTCGGCGCGCAGGCCATCGGCATCGTCGCGCGTCCC
|
|
| Amino Acid Sequence |
>Uncharacterized protein ImpI/VasC
MPLRLTITSYHKLTPGQCSEKVLDQGQLTIGRGPDNDWVLPDPERLVSSRHCTILNRDGVYYLTDTSTNGVLLVNAGHRLRRGNSEPLQDGETVRLGEYD ILVQLGHDIALPGSGNPQTDPFTSFDALMSRQAAGSAPAFAEPAPTPHPAVTAHFQGGSPLDTKPDLFDFLTPPPPGAAPRPDHVPAEQHDFRPPEPVIP PPPATTPAPPPAGGAPLIPADWDPFAELLGNTPAPSATPVAQPLPTAEPTPLAMPFADPGITQQPQPQPQPQPQPQPQPQPQPQPASVAAPTPPASAAAS AGGDLLQAFLRGAGMTQLKVDPAGAEAQMEAIGRSYRGLVEGLVDVLRARASLKGEFRMAQTMIQPVQNNPLKFAPNVDEAMLLLLRRDNQAFMAPDRAV ADSFEDLKAHQLAVMAGVQAAIRHLLARFEPAALEARFGKPAGLSGLLPGARQAQNWDSFTELYAKILREAEDDFQELFGREFSRAYEEHSARLRRS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|