Pseudomonas aeruginosa PA1R, PA1R_gp2548
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PA1R, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGAGTTTTTCGGCAAGGAATGCCGCATGACCCCGCACGATTCTGCGAAGGCATGCCCGCGACAGACGAGCCCTTCCGGCCCATGTCTCCAAAAGAGCG TGGATCGAAGGTATTTCACTACTTCACGAGAGTGTGGCGAGCAATGAAGAGTTTTGCGTCGGTAAGTGCGCCATTAGCGCTTGAAACAGCCCCCCGCAGA CGCGACCGCAGCGGATACCTCATGACCAGAGCCTGACGGCCCGTTCCGTCGCGAATGTGCTTGCACGACCGGATGCCCGCATGGGCCAGCCAGGCTGCCA GATCGCCAGCCCCGCGCCCGGCATCCATAGGCGATGACGCCCGGCGTCCCGCCGTTGTTGCGAAGAATCGGACATGACGGCTCCCTCCGCCGCTGCCTGC CGGCCCGTACCGGCCTCGGCCCCGCCCCGTCTGTCGTCAATTTGGTGCTGAAGATTTTGGAGAAGCGTTAATGGCGCAAAACGATCACGAAACAGTCGAC
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| DNA Sequence for Gene |
>PA1R_gp2548
ATGCTGCTGGTAGGCGCCGGCATCATGAGCGCGACCCTGGCGGTCCTGCTCAAGGAACTCGACCCCAACCTGAAGATGGAAGTCGTCGAACTCCAGGAGT CCGGCGCGATCGAAAGCTCCAACCCGTGGAACAACGCGGGCACCGGCCACGCCGGCCTGTGCGAGCTGAACTACACCCCGCAGTCGGCCGACGGCAGCAT CGACATCAAGAAAGCCGTGGGCATCAACACCATGTTCGAGGTGTCGAAGCAGTTCTGGTCGCACCTGGTCGCCAAGGGCACCTTCGGCTCGCCGAAGACC TTCATCAACCCGGTACCGCACCTGAGCTTCGTGCGCGGCAGTGAAGGCATCGCCTACCTGAAGAAGCGCTTCGAATCGCTGACCAGGCACCACGCTTTCG AGACCATGGTCTACTCCGAGGACAAGACCACCCTCGCCGAGTGGATGCCGCTGATGATGCCGGGTCGTCCGGCCGACGAAGCGATCGCCGCGACCCGCGT CGAGGGCGGTACCGACGTCAACTTCGGCGCCCTGACCAACCAGCTCCTGCAACACCTGGCGCAACAGCCGGGCGCGCAGATCCGCTACAACCAGAAGGTC ACCCACCTGCGCCGCGCCGATAACGGCTGGCGGGTCACCGTCAAGGACACCCGCAACGGCGGCGACCGCGAGATCCAGGCACGCTTCGTCTTCCTCGGCG CCGGCGGCGGCGCCCTGCCGCTCCTGCAACTTTCCGGCATCCCGGAAGGCAAGGGCTTCGGTGGTTTCCCGGTGAGCGGCCAGTGGCTGCGCTGCGACAA CCCGGAAATCGTCAAGCAGCACCAGGCCAAGGTCTACAGCCAGGCCGAGGTCGGCTCGCCGCCGATGTCCGTGCCGCACCTGGACACCCGTGTGGTGGAC GGCAAGAAATCCCTGCTGTTCGGCCCCTATGCCGGTTTCTCCACCAAGTTCCTGCGCCATGGCTCGTTCCTCGACCTGCCGCTGTCGGTACGCCCGGGCA ACATCCTGCCGATGCTCTCGGTGGCCCGCGACAACATGGACCTGACCCGCTACCTGATCGGCCAGGTCATGCAGTCGCCGGAACAGCGCCTGGAAGCCCT GCGCAAGTTCTACCCCGAAGCCAGGGCCGAGGACTGGCGCCTGGAAGTCGCCGGCCAGCGCGTGCAGATCATCAAGAAGGATCCGAAGAAAGGCGGCATC CTGCAGTTCGGCACCGAGCTGGTGGCCGCCCACGACGGCTCCATCGCCGCCCTGCTGGGCGCCTCGCCGGGCGCCTCGGTGACCGTCTCGATCATGCTCG GCCTGATCGAGCGCTGCTTCCCGGAGCAGGCCCGCTCGCCGGAGTGGAGCGCCAAGCTGAAGGAAATCTTCCCGGCTCGCGAGAAAGAGCTGGAAAGCGA CGCCGAGCTGTACCGCAGCGTCAGCAGCCGTTGCAGCGAGGTGCTGGAACTGACCGCGAAGAACGACGTGCAGGCCCCGGTCAACGCCGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGCGCTACGGAACAAGCCGCCTTCGGGCGGCTTTTTCATTTGTGGAGTCAGGCGCCGGCCTCGCAATTGATCATCCAGGACACCCCGAAACGGTCCAC CAGGGTACCGAAACAGGGCGACCAGAAGGTCTTGCCCAACTCCAGCTCGACCCGCCCGCCGTCCTCCAGCAAGGCGTCATAGCAGCGCCGCGCCTGCTGC GGGTCGCGGGTATTCAGTGAAAGGGAAATCCCGGAGATCGGCTGCAACGCCGGCCCGTGCCCGTCCGAGGCCATGATCTGGCTGTCGCCGATCTGCAGGT TGGCGTGCATCACCTTGTCGCACCAGCCTTCGGGCACCACCACCGGACCGGGCGCCTCGTCGAAACGGAACAGGAAACTCACCCTGGCACCGATGGCGTG TTCATAGAAACGCAGGGCCTCTTCGCAACGGCCGTTGAAGCAGACGTAGGGCTGGACGTACATGGGAACCTCGGCAGGCTGTTTTTCCTGTGAGTGTAGA
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| Amino Acid Sequence |
>Malate:quinone oxidoreductase
MLLVGAGIMSATLAVLLKELDPNLKMEVVELQESGAIESSNPWNNAGTGHAGLCELNYTPQSADGSIDIKKAVGINTMFEVSKQFWSHLVAKGTFGSPKT FINPVPHLSFVRGSEGIAYLKKRFESLTRHHAFETMVYSEDKTTLAEWMPLMMPGRPADEAIAATRVEGGTDVNFGALTNQLLQHLAQQPGAQIRYNQKV THLRRADNGWRVTVKDTRNGGDREIQARFVFLGAGGGALPLLQLSGIPEGKGFGGFPVSGQWLRCDNPEIVKQHQAKVYSQAEVGSPPMSVPHLDTRVVD GKKSLLFGPYAGFSTKFLRHGSFLDLPLSVRPGNILPMLSVARDNMDLTRYLIGQVMQSPEQRLEALRKFYPEARAEDWRLEVAGQRVQIIKKDPKKGGI LQFGTELVAAHDGSIAALLGASPGASVTVSIMLGLIERCFPEQARSPEWSAKLKEIFPAREKELESDAELYRSVSSRCSEVLELTAKNDVQAPVNAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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