Strain | Pseudomonas aeruginosa PA1R, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
AACCGGATGCCGAGCAAATGTCCAGGCTGGACCGGCGCGGCGTGACGATCGAGCGCGAAGCCGTGGTCGCGCTGGGCGGCGCGCGCGCCGACGTGACCCT GGCCAGTGGCCGCACGATTACGCTCGCGGGGTTGTTCACCCAGCCGCGTACGCGCATGGCCAGCCCGCTGGCGGCGTTGCTCGGCTGCGAGTTCGAGGAC GGCCCGAGCGGGCCGTTCATCAGGACCGACGGCATGCGCGAAACCAGCGTTCCCGGCGTCTTCGCCTGCGGCGACGCGGCGCTGGCGGCCGGCAACGTCG CCATCGCGGTGGGCGACGGCGCGCGCACCGGTGGCGCGGCGCATCATTCGCTGCTGTTCCGCTGACGCCGGAGGCTGACAGGCCAAGGATCCGGCCCACC GCCCGGCAAATCTTTCGAACTCCCCGGCGCTCCAGCTTTCCACTCTCCTGCATGTCACGCCACGGCGCCCGCCACGGGCGCCCCAGCAGAGGAGAAAACC
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DNA Sequence for Gene |
>PA1R_gp2062
ATGAGCGCGAAGCTGCAAGGCAAGAACGTCCTGGTCATCACCGCCAACACCGGCATCGAGCGCGACGAGCTGCTCGAACCGCTGAAGACCCTGAAGCAAC AGGGCGCCACGGTCACCCACGCGACCATCGAGGGCGGCGAAGCGCAGACCTGGGTGCACGACAGCGAGAAGGACCTGATCGTCAATTCCGACGCCAGGCT GCAAGGCCTGCGCGCCGAGGACTACGACTTGCTGCTGGTCCCCGGCGGCACGGTGAATGCCGACACCCTACGCCAGGACAGCGAGGCCCGGCGCCTGGTC AGGGAATTCAGCGACGCAGGCAAGACGGTCGCCGCCATCTGCCACGGCCCCTGGCTGCTGATCGACGCCGGTGTCGCCCGCGGCAAGACCCTGACCTCCT ATTCCAGCGTGCGTATCGACCTGACCAACGCCGGCGCGGACTGGGTCGACACGCGGGTGAAAGTCTGCCCGGCGAACGGCTGGACCCTGATCACCTCGCG CAACCCGGGTGACTTGCAGGCGTTCAACGAAGCCATCGGCGAAGCCCTGCAGGCGGCCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCGTCATTCGCGGAGGCGACCGGTGGACACCCTGAAGATCGCCACCTTCAACGTCAACGGCATCCAGACCCGGCTGGCCGCGCTGCTGGCCTGGCTGGAG CGGGAAGCGCCGGACATCGTCTGCCTGCAGGAACTGAAAACGCCCGACGCGCGCTTCCCCGCCGCGGCGCTGGAGAAGGCCGGATACGGCGCGATCTGGC AGGGCCAGTCGGCGTGGAACGGCGTCGCCATCCTCGCCCGCGACAGCCAGCCGCTGGAGGTACGCCGCGGCCTGCCGGGCAACGCCAGCGATCCCCACAG CCGCTACCTCGAAGCGGCCGTCGACGGCCTGCTGGTGGCCAGCCTGTACCTGCCCAATGGCAATCCCCAGCCGGGACCGAAGTTCGACTACAAGCTGGCC TGGTTCGAGCACCTCATCCGACACGCCGCCGAGCTGATGGAGAGCGGCCATCCGGTGGTGCTGGCCGGCGACTTCAACGTGGTGCCCAGCGACTTCGATA
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Amino Acid Sequence |
>ThiJ/PfpI family protein
MSAKLQGKNVLVITANTGIERDELLEPLKTLKQQGATVTHATIEGGEAQTWVHDSEKDLIVNSDARLQGLRAEDYDLLLVPGGTVNADTLRQDSEARRLV REFSDAGKTVAAICHGPWLLIDAGVARGKTLTSYSSVRIDLTNAGADWVDTRVKVCPANGWTLITSRNPGDLQAFNEAIGEALQAAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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