Pseudomonas aeruginosa PA1R, PA1R_gp1570
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PA1R, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCTTCTTGTTTCCCAGCAGCAGGCCGATGGCGCCAGCCGCCAGGGCTCCGCCGCCGGCGCCGGAAAGCAGGCTGCCGAGCTGTCCGCCGCCGCTGGCGC CGGGCTTGCCGCCGGTCTTGTTCTGCAACATTTCCTGCCCGGACTTGAGCAATTGGTCGAGCAAACCACGGGTATTCATGAGGAACCTCCAGGACGTTCG GTAACAACCGGATTCGACCGACTCTAGCCCTTCGCGTCCGCGCTGCCCGCCGGGAGTTTGCTTCGAGATATTGCCGGCCTCCGCGGACACCTTGGCAAAG CGCGACGCATGTCACATTTTTCCAGATAGAGGCCTAGTGCCAGCAGAAAGCCCTTCGACGCGCCGGCATGGCCCTCTAAACTCCGCGCCCGCCCGCGACT GCGGGTCGGCGTCCAACGCCAGCCGCTCCGCGCGCATTCGCAACAGCAAACTGTGAACATGGCTCCCCCGAGCCACCCACTGCCTCGCAAAGGACTTCCC
|
|
| DNA Sequence for Gene |
>PA1R_gp1570
ATGACCATCTCCCGCCGCGACTTCCTGAACGGCGTAGCCCTGACCATCGCCGCAGGCCTGACCCCCGCCGAGATCCTCCGCGCCGCCCCCGGCGGCCGCT ACTATCCGCCCGCGCTCACCGGCCTGCGCGGTAGCCATCCGGGCGCCTTCGAAGTCGCACACCAGATGGGCTGGGAGAAGAAGACCTTCGATGTCGACCA CCTGCCGATCGAAGAGGAATACGACCTGGTGGTGGTCGGCGGCGGCATCAGCGGCCTCGCCGCCGCCTGGTTCTATCGCGAACGGCACCCCGCGGCGCGC ATCCTCGTCATCGAGAACCACGACGACTTCGGCGGCCATGCCAAGCGCAACGAATTCCAGGCCGGCGGGCGCACCATCCTCGGCTACGGCGGCAGCGAGT CGCTGCAATCGCCGAACGCCCTCTACAGCGAAGACGCCAAACACCTGCTGAAACGCCTGGGCGTCGAGCTCAAGCGCTTCGAGACAGCCTTCGACACCGA CTTCTACCCCGGCCTGGGCCTGTCCCGCGCGGTGTTCTTCGACAAGGCCAGCTTCGGCGTGGACAAGCTGGTCAGCGGCGACCCGACGCCGATGGTTGCC GACGAGGTCCCCCGCGATCGTCTCAATGCCCGCTCCTGGCGCGCCTTCATCGGCGACTTCCCGCTGAGCCGCGAAGACCGGGAGGCGCTCATCGCGCTGT ACGAATCACCTCGCGACTATCTTGCCGGCAAGAGCGTGGAAGAAAAGGAAACCTACCTGGCGAAGACCAGCTACCGCGACTACCTGCTCAAGAACGTCGG GCTCTCGGAAACCTCGGTGAAGTACTTCCAGGGCCGCAGCAACGACTTCTCTGCCCTCGGCGCCGACGCCCTGCCGGCGGCCGACGCATACGCCGCCGGC TTCCCCGGCTTCGACGCCCTCGGCCTGCCGCAACCCAGCGAGGAGGCCCAGGCGGAAATGGACGAGCCGTACATCTACCATTTCCCCGACGGCAACGCCT CGCTGGCTCGGCTCATGGTGCGCGACCTGATCCCCGCGGTGGCGCCGGGCCGAGGCATGGAGGACATCGTCATGGCCCGCTTCGACTACTCGAAGCTGGA CCTCGCCGGGCACCCGGTGCGCCTGCGCCTGAACAGCACCGCCGTCAGCGTGCGCAACCGCGCCGGCGGCGTCGATGTCGGCTACAGCCGCGCCGGCCGC CTGCACCGGGTACGCGGCAAGCACTGCGTGATGGCCTGCTACAACATGATGGTGCCGTACCTGCTGCGCGACCTCTCCGAGGAGCAGGCCCACGCGCTGA GCCAGAACGTCAAGTTCCCGCTGGTGTACACCAAGGTATTGCTGCGCAACTGGCAGGCCTGGAAGACCCTCGGCATCCACGAGATCTACGCGCCGACCCT GCCCTACTCGCGGATCAAGCTGGACTTCCCGGTCGACCTCGGCAGCTACCGGCATCCACGCGACCCGCGGCAGCCGATCGGCGTGCACATGGTCTACGTG CCGACCACCCCGAACGCCGGCATGGACGCCCGCACCCAGGCTCGCGTAGGCCGCAGCAAGCTCTACGCGATGAGCTTCGAGCAACTGGAAAAGGACATCC GCGACCAGCTCCAGGCCATGCTCGGCCCGGCGGGCTTCGACCACCGCCGCGACATCACCGGCATCACCGTGAACCGCTGGTCGCACGGCTACTCCTACTT CATGAATACCCTCTACGACGACGAGGCGGAAAGCGAAGCGCTGATGGAACTGGCGCGAAGCAAGGTCGGCAATGTCGCCATCGCCAACTCGGATGCGGCC TGGGATGCCTACGCCCATGCCGCCATCGACCAGGCGGTGCGGGCAGTCCGCGAACTGGGTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AGGACGGCGACGGCAGCGGAACCCGCGCTGCCGTCGCGCCCTTCCGATGTCCAGCAAGACTGACAGAAATGTACTGACAGCGATTTCAACCCCTACTCCA CGAAAGCCGTTCAAAGACCCTATGTTTCTCGGCCTCCCCTCGAAATAACCTAGGGAAAACACATAGGAAATTTCCTACTAGCATTCAGAAAAGTCCTGAT TAAACCGACAGACACCATCGCTAGAATTCGAGCCCGTCCGGAGCTGCCTCCTGGCGGATTATCCGCCTGCCGGCGTTGCCGGTAGCCGCTGCGGAAACCT CCACCTCGATCGGGTTCGATTTCATGAAAACACGCGTCATCCTCGTCGACGACCACGCCCTCACCCTGATCGGCATGCGCTATCTGCTGAGTGCGTACGA CGACCTGCGGATCGTCGCCCAGGCCCAGGACGCCGATGGCTTGCTGGCGCAGCTCGAAGCGCACCCCTGCGACCTGCTGATCACCGACCTGATGATGCCC
|
|
| Amino Acid Sequence |
>hypothetical protein
MTISRRDFLNGVALTIAAGLTPAEILRAAPGGRYYPPALTGLRGSHPGAFEVAHQMGWEKKTFDVDHLPIEEEYDLVVVGGGISGLAAAWFYRERHPAAR ILVIENHDDFGGHAKRNEFQAGGRTILGYGGSESLQSPNALYSEDAKHLLKRLGVELKRFETAFDTDFYPGLGLSRAVFFDKASFGVDKLVSGDPTPMVA DEVPRDRLNARSWRAFIGDFPLSREDREALIALYESPRDYLAGKSVEEKETYLAKTSYRDYLLKNVGLSETSVKYFQGRSNDFSALGADALPAADAYAAG FPGFDALGLPQPSEEAQAEMDEPYIYHFPDGNASLARLMVRDLIPAVAPGRGMEDIVMARFDYSKLDLAGHPVRLRLNSTAVSVRNRAGGVDVGYSRAGR LHRVRGKHCVMACYNMMVPYLLRDLSEEQAHALSQNVKFPLVYTKVLLRNWQAWKTLGIHEIYAPTLPYSRIKLDFPVDLGSYRHPRDPRQPIGVHMVYV PTTPNAGMDARTQARVGRSKLYAMSFEQLEKDIRDQLQAMLGPAGFDHRRDITGITVNRWSHGYSYFMNTLYDDEAESEALMELARSKVGNVAIANSDAA WDAYAHAAIDQAVRAVRELG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|