Pseudomonas aeruginosa PA1R, PA1R_gp0512
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PA1R, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGAGTATTTCTACTTCCACAACTTCATCTACGAGTCGGTGTGGAAGAACAACCTGCGCCGCAGCAGTGAACGCACCGCCACCTTCGACCTGCTGCACAAG TACGGTCCGGACTACAAGGTGGTGTTCGTCGGCGACGCGGCGATGGCGCCCTACGAAATCACCCAGGCCGGCGGCAGCGTCGAGCACTGGAACGAGGAAG CCGGTTACGTCTGGATGCAGCGCTTCATGGAGAAGTACAAGAAGCTCATCTGGATCAACCCCTATCCGAAGGACACCTGGAACTACACGGCGTCCACCGG CCTGGTCCGCGAACTGGTCAAGGAACAGATGTATCCGTTGACCCTGAGCGGCCTGGAGGAGGGTATGCGCTTCCTCTCGCGCGGTTGAGCCAACTGCCTG CGGGACCGGCGACAGGCGCGGCGGCACGCAACTTGCCTACCCTGTGTATCCCGTCCGCGCGGTAACAGCGCGGCGCGCCACCGGTAACGATGGGCACGCC
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| DNA Sequence for Gene |
>PA1R_gp0512
ATGATCGATTCGACCTTCTCCCGCGCCACCTGGCTCAACTCGCTGCACATGTCGACCCTCACTCTCTCGCTGCTGGAGAAGGAAGGGTTCGCCCGCGAGC AACTGCTCGAAGGCAGTGGCATCACCCCCGCCGACCTGCTCGACCTGCGGCGCCTGATCAGCCCCTGGCAGGAGCAGCAGGTGTTCGCCAACGCCTGCCG GCTCAGCGACGAGCCGGCCCTCGGCCTGCGCCTGGGGCTGCGCACGCGGATTTCCGCCTACGGCCTGCTCGGCTACGCGCTGCTCTCCGCGCCGACCCTC GGCGAGGCGCTGCGCATCGGCCTCAGCTATCCGGTCTTGCTCGGCACCTACTTCCACCTGTCGCTGGAAGTCGCCGACGGCCGCGCCTGGCTGGTGGCCA CCGGCTACGGCGAGGACGAGGCGCTGCGGCCATTCAACACCGAGCTTTGCCTGGGCTCGCTGAAGGTCACCTGCGCCGACCTGCTCGGCCAGCCGCTGCC CTTGCTGGAAGCGGCCTTCGACTATGCCGGCGACGAGGCGATGGCGCGGGCCTACGCCGAGGGTTTCGCCTGCGAGTTGCACTTCGAACGCGAGCGCAGC GCCATCGGCTTCGCCGCCGAATGGCTGGAGCGCCCGTTGCCGCTGGCCGACCCGGTGACCCACCGGGAGATGCTGGAACAGTGCCGGCGGCAGAACATCG ACCTGGCCGCGCGCCGCGCCTGGCTGGACAAGGTCCGGGCGATCCTCGCCGAGCGCCTGCAGGACCCGCCGGGCCTGGAGGAACTGGCGCGGCGCCTTAA CTGTTCGTCGCGCAGCCTGCGCCGGCACCTTCAGCAGCAGCGCACCAGCTACCAGCAATTGCTCGACGAGTTGCGCTTCGCCCGCGCCAAGGAGTTGTTG CAGAGCGGCGACATGCCGATCTACCGGATCGCCGAGGAACTCGGCTTCAGCGAGACCGCCAGCCTGCGCCATGCCTTCCAGCGCTGGAGCGGCCAGCCGC CGAGCCATTTCCGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGCTCGCTCAGGCGGAGGGGCTGGTGTCGGCGTGGCGCCGCCGCCGTTCGTCCGCCACCTCACCCAGGGATTTTGCCGCGCCGTCGCCAATCCAGGCCA TGAAGGCACGATCGAAGCGGAAGTCGGCGCCGCGCAGCACGACGAGGAAGCGCCGTACGTCCTGGGCGTTGCGCTAGTCGCGGCACACTGCGGTGTCGCG GGTGATGGTGTCGCCGTGCCAGCCGAAGACCATCTGTCGTTTCTCTGCGCGCGCTGGAGCGGGCGGGCCAACGACGGCCCGCCCACGGGCCGTCAGGACA CCGGGTCTTCGATCAGCCGGTCATAGGGCGGCAGGCCGCTGTATTGGCCCAGGGCTTGCTCGTAGGCGTTCTTCAGGTCGTCGGCGGCGAGGTCGTAGCC GACCAGCAACTGTTCGAGTTCAGCGGCGTTCTGCGGGTCGTCGTTCTGCAACTGCGCGTCGAGTTCGCGGGTGCGCGCGGCGACGCACTGGATCGCCACC
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| Amino Acid Sequence |
>putative transcriptional regulator, AraC family
MIDSTFSRATWLNSLHMSTLTLSLLEKEGFAREQLLEGSGITPADLLDLRRLISPWQEQQVFANACRLSDEPALGLRLGLRTRISAYGLLGYALLSAPTL GEALRIGLSYPVLLGTYFHLSLEVADGRAWLVATGYGEDEALRPFNTELCLGSLKVTCADLLGQPLPLLEAAFDYAGDEAMARAYAEGFACELHFERERS AIGFAAEWLERPLPLADPVTHREMLEQCRRQNIDLAARRAWLDKVRAILAERLQDPPGLEELARRLNCSSRSLRRHLQQQRTSYQQLLDELRFARAKELL QSGDMPIYRIAEELGFSETASLRHAFQRWSGQPPSHFRA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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