Pseudomonas monteilii SB3078, X969_27245
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas monteilii SB3078, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGACCGCAGCTGTCGCCAAGGAAGAGACCTTCGGCCCACTGGCGCCGCTGTTCCGCTTCAAGGACGAAGCCGAAGTCATCGCCATGTCCAACGACACCGA GTTCGGCCTGGCCTCGTACTTCTACGCCCGCGACATGAGCCGTGTGTTCCGTGTTGCCGAAGCCCTGGAATACGGCATGGTGGGTATCAACACCGGCCTG ATCTCCAACGAAGTGGCACCTTTCGGCGGCATCAAGGCTTCGGGCCTGGGCCGTGAAGGTTCCAAGTACGGTATCGAGGACTACCTCGAAATCAAATACC TGTGCATCAGCGTCTGATCGCACGGTAACGGCTTTACCTCTGCCAGCGGGGCGCGAGAGCGACGTCTCGCTGGCCTTTTTGACATCGCAGTACCTGGTGG CCAGGGCGTTCACGGCAGTCGATCAACGAATACTGTTCGCGGGCTCACCCAGCCACCCCCGAATAAAAGCGCCACTCCAAACCGGCGCAATGAGGGCATT
|
|
| DNA Sequence for Gene |
>X969_27245
ATGAGCAAGACCAACGAATCCTTGATGCAACGTCGTGTAGCTGCCGTCCCACGTGGCGTTGGCCAGATCCACCCGATCTTCGTCGACACCGCGAAGAACT CGACCGTGATCGACGTTGAAGGCCGCGAACTGATCGACTTCGCCGGCGGCATCGCAGTACTGAACACCGGCCACCTGCACCCGAAAGTGGTTGCGGCCGT GCAAGATCAGCTGACCAAGGTCAGCCACACCTGCTTCCAGGTGCTGGCCTACGAACCCTATGTAGAGCTGTGCGAAAAGATCAACAAGCTGGTACCAGGC GACTTCGACAAGAAGACCCTGCTGGTCACCACCGGCTCCGAAGCCGTTGAAAACGCCGTCAAGATCGCCCGTGCCGCCACTGGCCGTGCTGGCGTCATCG CCTTCACCGGCGGCTACCACGGCCGTACCATGATGACCCTGGGCCTGACCGGCAAGGTCGTACCGTACTCCGCTGGCATGGGCCTGATGCCAGGCGGCAT CTTCCGCGCCCTGTTCCCGAGCGAACTGCACGGTATCAGCGTTGACGACGCCATCGCCTCGGTCGAGCGCATCTTCAAGAACGACGCCGAGCCGCGCGAT ATCGCCGCGATCATCCTCGAGCCGGTACAAGGCGAAGGCGGCTTCCTGCCAGCGCCGAAAGAGCTGATGCAGCGCCTGCGCGCCCTGTGCGACCAGCACG GCATCCTGCTGATCGCCGACGAAGTGCAGACTGGCGCTGGCCGTACCGGCACCTTCTTCGCCATGGAGCAGATGGGCGTTGCGCCTGACCTGACCACCTT CGCCAAGTCCATCGCTGGCGGCTTCCCGCTGGCCGGTGTGTGCGGCAAGGCCGAGTACATGGACGCCATCGCCCCGGGCGGCCTGGGCGGTACCTACGCC GGTTCGCCGATCGCTTGCGCCGCGGCCCTGGCCGTGATCGAAGTGTTCGAAGAAGAAAAACTGCTGGACCGCAGCAAGGCTGTGGGTGAGCGCCTGACCA CTGGCCTGCGCGAAATCCAGAAGAAGCACCCGATCATCGGCGACGTCCGTGGTCTGGGCTCGATGATTGCCGTCGAAGTGTTCGAGAAAGGCACTCACAC CCCGAACGCTGCTGCTGTTGGCCAGGTTGTGGCCAAGGCACGTGAGAAGGGTCTGATCCTGCTGTCTTGCGGCACCTACGGCAACGTCCTGCGTATCCTG GTTCCGCTGACCGCCGAAGACGCACTGCTGGACAAAGGCCTGGCCATCATCGAAGAGTGCTTCGCCGAACTGGCGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCGCTGATTCGCCCCAGTAAGAAAACCGCCCGGGCAATGCCCGGGCGGTTTTTTTTCGCCTGGTGTTCAGGTGTCGGAGGATGCCCAGACTGCGCTTGGG AAGAAGCGCTCGACCAAGTCGTCGTTTTTCAGCATCGCGGCATACTCGTCGCGCTTGAAGGGGTTGCCTGTGCGCAGGTCGAATACGGGGTGTTCCACAG GAACCTCGTCTGGGACTTCCTTGAGCTTCACATTGACGAAACGGAAATCGTCACCAACCACTTCGCCGATGTCATCGATCTGGAAGCGGCATCCCGGTGG GAACAGTGTTTCCGCTTCTGTGCTGGACCATGACAGCGGCGCAATGGGGGCGCCGCTGTGGTACTGACCGGCAGGCAGCTCAAAGACCACCGATGTATTG TCGAAACTGCCCGTTATGTTGTCCGCCGATGCGAGCTTATCGGTGGCGAAATCGCGTACGACGTAAGGGTTTTCCGTAAAGGAAGCCAGGTCCGAGTTGA
|
|
| Amino Acid Sequence |
>4-aminobutyrate aminotransferase
MSKTNESLMQRRVAAVPRGVGQIHPIFVDTAKNSTVIDVEGRELIDFAGGIAVLNTGHLHPKVVAAVQDQLTKVSHTCFQVLAYEPYVELCEKINKLVPG DFDKKTLLVTTGSEAVENAVKIARAATGRAGVIAFTGGYHGRTMMTLGLTGKVVPYSAGMGLMPGGIFRALFPSELHGISVDDAIASVERIFKNDAEPRD IAAIILEPVQGEGGFLPAPKELMQRLRALCDQHGILLIADEVQTGAGRTGTFFAMEQMGVAPDLTTFAKSIAGGFPLAGVCGKAEYMDAIAPGGLGGTYA GSPIACAAALAVIEVFEEEKLLDRSKAVGERLTTGLREIQKKHPIIGDVRGLGSMIAVEVFEKGTHTPNAAAVGQVVAKAREKGLILLSCGTYGNVLRIL VPLTAEDALLDKGLAIIEECFAELA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|