Strain | Pseudomonas monteilii SB3078, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GTCGAGCAGTGTCGCCAAGGTGCTGGACTTGCCACTGCCGGTCGGCCCACCGACGAGGATCAAGCCATCTCGGCACTGCGCAACAGCTTGAAACACATCG CCCAGGTCGAGTTCATCGAGCGTGGCGATATGCCCCGGGATCAGGCGAAAGGTGGCCGCAGGGCCGTGCAACTGGCGAAACAGATTCAGCCGAAAGCGCC CTAGCGCCGGCAATTCCAGCGCCAGGTCCAGCTCATCACCCTGGGCCCACTGTCGGCGCTGGTCTTCATCCAGCATGGGTGCCATGCCCTCGATCAAGGC GACCGGGCCCAAGGTCGGCAGGGCCATGCGCTGCAGCTCGCCATCCAGGCGCAACATCGGTAACTGGCCCGCCGCCAGGTGCAGGTCGGAAGCCCCCGCA TCCACGGCCCGGGCCAACAGGTCGGTCACATCCATGAGACTCCCCAAAGGCCTTCAAGTAGGTAGAATGCCGCAAACCCTCCAGCCGCCGGCATCAGTCC
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DNA Sequence for Gene |
>X969_24380
ATGTCCACCCTAGCAGACAACCTTTCCGCTATTTCCGCCCGTATCGCCAGCGCTGCCCAGGCTGCCGGGCGTGATCCGGCCAGCGTCCAGTTGCTGGCCG TGAGCAAGACCAAGCCAGCCAGCGCCATCCGCGAAATCCACGCCGCCGGCGTATACGATTTCGGGGAAAACTACCTACAGGAAGCGCTGACAAAGCAGCA GGCACTCGGCGACCTGCCCTTGATCTGGCACTTCATCGGCCCCATCCAGTCGAACAAGACCAAAGCCATCGCCGAGCATTTCGACTGGGTACATTCCGTG GACCGCCTGAAAATCGCCCAACGCCTCTCGGAGCAGCGCCCGGCCGGTCTGCCACCACTGAACATCTGCCTGCAGGTGAACGTCAGCGGCGAAGACAGCA AATCCGGCTGCACCCCTGCCGACCTGCCGGCCCTGGCCAAAGCGGTAGCCGCACTGCCCAACCTGCGCCTGCGCGGGCTGATGGCCATTCCCGAACCCAC TGATGACCGCGCCGCCCAGGAAGCCGCCTTCGCCACCCTGCGCCAGTTGCAGGAAGGCCTTGGCCTTGGTCTGGACACCCTGTCCATGGGCATGAGCCAC GATCTGGAAGCGGCCATTGCACAGGGTGCGACCTGGGTGCGTATCGGTACCGCCCTGTTCGGTGCCCGCGATTACGGGCAGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTCCATGCTTTACTCACTCTTTCCTACAAGGACCTGACATGAGCAAGACTCGTATTGCCTTTATCGGCGCCGGCAACATGGCCGCCAGCCTGATCGGTGG TCTGCGTGCCCAGGGCCTGGACGCCTCGCAGATCCGCGCCAGCGACCCGGGCGCCGAGACCCGCAGCCGCATCCAGGCCGAGCACGGCATCGAAACCTTC GAGAACAACGCCCAGGCCATCGATGGCGCCGACGTCATCGTGCTGGCGGTCAAGCCGCAGGTCATGAAAGCCGTATGCCAGGCCCTGCAACCGAACCTGC AGGAAGGCCAGCTGATCGTTTCCATTGCCGCCGGCATCACCTGCGCCAGCCTGCAAAGCTGGGTCGGCGCTCGCCCTGTCGTGCGCTGCATGCCCAACAC CCCGGCACTGCTGCGCCAGGGCGTCAGCGGCCTGTACGCCACCGCGGAAGTATCCAGCGAACAACGCCAGCAGGCCGAGCAACTGTTGTCGGCCGTGGGC
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Amino Acid Sequence |
>hypothetical protein
MSTLADNLSAISARIASAAQAAGRDPASVQLLAVSKTKPASAIREIHAAGVYDFGENYLQEALTKQQALGDLPLIWHFIGPIQSNKTKAIAEHFDWVHSV DRLKIAQRLSEQRPAGLPPLNICLQVNVSGEDSKSGCTPADLPALAKAVAALPNLRLRGLMAIPEPTDDRAAQEAAFATLRQLQEGLGLGLDTLSMGMSH DLEAAIAQGATWVRIGTALFGARDYGQP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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