Strain | Pseudomonas monteilii SB3078, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GAATAAGGAAAGCGCTGTGCGTCTGCGCCTGATCGCGGTCGGCTCGCGCATGCCGAAGTGGGTCGAGGAAGGCTGGCATGAATATGCCAAGCGCCTGCCC GCCGAGCTGTCGCTGGAGCTGGTGGAAATCCCGCTGAACACTCGTGGCAAGAATGCCGACGTCGCCCGCCTGATCCGTCAGGAGGGCGAAGCCATGCTGA GCAAGGTTCAGCCAGGGGAACGCATCGTCACCCTCGAGGTCCATGGCAAGCCCTGGAGTACCGAGCAGCTGGCGACCGAGCTGGACCGCTGGCGCCTGGA TGCGCGCACGGTGAATTTGATGGTGGGCGGCCCGGAAGGCCTGGCGCCCGAGGTCTGTGCGCGCGCCGAGCAACGCTGGTCGCTGTCGCCGCTGACCTTG CCGCACCCATTGGTAAGGATACTCATCGGCGAGCAGATCTACCGCGCCTGGACCGTGCTGTCCGGGCATCCTTACCATAAATGAGCCTGTAAGCAGTCCG
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DNA Sequence for Gene |
>X969_22930
ATGTCGCAGCCGATCCGTCTCAAGGACCACGAGAAAGACGCCCGCCTGGTGCGCAACCGCGTCGTGGTCGGCGCAGTCGCGATCATGCTGCTTATCTGCG TGCTGATTGCGCGTCTGTACTACCTGCAGGTCATCCAGCACGACTATCACTCGACGCTGTCGGAGAACAACCGGGTGCATGTGCAGCCGATCCCGCCGAC CCGCGGGCTGATCTTTGACCGCAACGGGGTGATCGTCGCCGACAACCGGCCCAGCTTCAGCCTGTCGATGACCCGCGAACGTGCGGGTAACTGGCAGGAA GTGCTGGATACCATCGTCGAAGTGCTGGAGTTGACGCCCGACGACCGCGCCCTGTTCGAGAAGCGCATGCGCCAGGGCCGCAGGCCGTTCGAGCCGGTGC CGATCCTGTTCGAACTCAACGAAGAGCAGATCGCCCGTGTGGCGGTGAACCAGTTCCGCCTGCCGGGCGTGGAAGTGGTGGCCCAGTTGGTGCGCCATTA CCCGCAGGGCGCGCATTTTGCCCATTCGGTGGGGTATGTGGGGCGGATCAACGAGAAAGAGCTGAAAACCCTCGACCCGGTGAACTACAGCGGCACCCAC CACATCGGCAAGACCGGCATCGAACGCTTCTACGAAGCCGACCTGCATGGCCAGGTGGGCTACGAGGAAGTCGAGACCAACGCCCGCGGCCGCGTGCTGC GGGTGCTCAAGCGCACCGACCCGAAACCGGGCAAGGACATCGTGCTGAGCCTGGACATCAAGCTGCAGGAGGCCGCCGAGGCTGCCCTGGGTGGCCGGCG TGGTGCGGTGGTGGCGCTCGACCCGCGTACCGGCGAGGTGCTGGCGATGGTCAGCCAGCCCAGCTTCGACCCCAACCTGTTCGTCACCGGCATCGGCTTC AAGGCCTATGCCGAACTGCGCGACTCGATCGACCGACCGCTGTTCAACCGCGTGCTGCGCGGCCTGTACCCGCCAGGTTCGACCATCAAGCCGGCGGTGG CCATCGCCGGCCTGGACAGCGGCGTGGTCAATGCCGGCAGCCGGGTGTTCGACCCGGGCTACTACCAGTTGCCCAACTACGACCACAAATACCGTAACTG GAACCGTTCGGGCGATGGCTGGGTCGACCTGGACACCGCGATCATGCGCTCCAACGACACCTACTTCTACGACCTTGCCCACAAGATGGGCATCGATCGG CTGTCCAGCTACATGAACAAGTTCGGCATCGGCCAGCGGGTTTCCCTCGACATGTTCGAGGAATCCGCCGGGCTGATGCCATCGCGTGAATGGAAGCGCG CCACCCGCCGCCAGGCCTGGTTCCCCGGCGAAACCCTGATCCTAGGCATCGGCCAGGGCTACATGCAGGCCACGCCGCTGCAACTGGCCCAGGCCACTGC GCTGATCGCCAACAAGGGCGTGTGGAACCGCCCGCACCTGGCCAAGACCATCGAAGGCCAGCCGCCGGTGGACGACAACCCCATGGAAAACATCGTGCTG CGTGACAAGTCCGACTGGGCCAAGGTCACCCATGGCATGGAGCAGGTGATGCACAACGCCCGCGGTACCGCACGCAAGGCGGCCATCGGCTCGCAGTACC GCATTGCCGGCAAGAGTGGTACCGCCCAGGTGGTGGCAATCAAGCAGGGCGAGAAGTACGACCGCAACAAGCTTCAGGAGCGCCACCGCGACCACGCCCT GTTCGTCGCCTTCGCCCCGGCCGAGGACCCGAAGATCGTGGTTTCGGTGATGGTCGAGAACGGTGAGTCCGGCTCGGGCGTTGCCGCCCCAGTGGTGCGC CAGGTGATGGACGCCTGGTTGCTCGACGAAAACGGCCGGCTCAAGCCCGAGTTCGCGCCTGCCACCGTTACCCAGGAATCAGCCCTGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGAACAATTTCGATCGCATGCTCTCCAGCGAGGATGTGATGCGTCGGCGCGCCAGCTTTCTGCAGCGCATCCACGTCGACGGCCCTTTGCTGATCATTCT GCTGACCCTCGCGGCCGGCAGCCTGTTCGTCCTGTATTCGGCCAGTGGCAAGAACTGGGACCTGCTGCTCAAGCAGGCCACCTCGTTCGGCATCGGCCTG GTGTCGATGTTCATCATCGCCCAGCTGGAGCCGCGCTTCATGGCTCGCTGGGTGCCGCTGGCCTACCTGGCCGGGGTGCTGTTGCTGGTGGTGGTGGACG TGATGGGCCACAACGCCATGGGCGCCACGCGCTGGATCAACATCCCCGGGGTGATCCGCTTCCAGCCCTCGGAGTTCATGAAGATCATCATGCCGGCGAC CATCGCCTGGTACCTGTCCAAGCGCACGTTGCCGCCGCATCTGAAGCATGTGGCGATCAGCCTGGTGCTGATCGGCGTGCCGTTCATCCTGATCGTGCGC
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Amino Acid Sequence |
>penicillin-binding protein 2
MSQPIRLKDHEKDARLVRNRVVVGAVAIMLLICVLIARLYYLQVIQHDYHSTLSENNRVHVQPIPPTRGLIFDRNGVIVADNRPSFSLSMTRERAGNWQE VLDTIVEVLELTPDDRALFEKRMRQGRRPFEPVPILFELNEEQIARVAVNQFRLPGVEVVAQLVRHYPQGAHFAHSVGYVGRINEKELKTLDPVNYSGTH HIGKTGIERFYEADLHGQVGYEEVETNARGRVLRVLKRTDPKPGKDIVLSLDIKLQEAAEAALGGRRGAVVALDPRTGEVLAMVSQPSFDPNLFVTGIGF KAYAELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDSGVVNAGSRVFDPGYYQLPNYDHKYRNWNRSGDGWVDLDTAIMRSNDTYFYDLAHKMGIDR LSSYMNKFGIGQRVSLDMFEESAGLMPSREWKRATRRQAWFPGETLILGIGQGYMQATPLQLAQATALIANKGVWNRPHLAKTIEGQPPVDDNPMENIVL RDKSDWAKVTHGMEQVMHNARGTARKAAIGSQYRIAGKSGTAQVVAIKQGEKYDRNKLQERHRDHALFVAFAPAEDPKIVVSVMVENGESGSGVAAPVVR QVMDAWLLDENGRLKPEFAPATVTQESAL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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