Pseudomonas monteilii SB3078, X969_22460
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas monteilii SB3078, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AAAAGCTCAGATCGTTGCCGAATACCAGCAAGCCGCCGGCGATACCGGTAGCCCGGAAGTGCAGGTTGCTCTGCTGACCGCCAACATCAACAAGCTGCAA GGCCACTTCAAGGCCAACGATAAAGACCACCACTCCCGTCGTGGTCTGATCCGTATGGTCAACCAGCGTCGTAAGCTGCTGGACTACCTGAAGGGCAAAG ACACCACTCGTTACAGCGCCCTGATCGGTCGCCTGGGTCTGCGTCGCTAATAGCGGCCTGGCCAGTGGTGTGCATGGCGTGTCGCAGGCTTCGGCAGGGC TGTTTTGCAGTGCTGCCGTTGGACACGCCACGCGTATCTCCGAGGTTGGCAGCCTGGCAATGCTGAGCGGATTTTCCGCTTGGTGCCAGGCTCCCAGCCT CGTGTTGTATCTGGACGGTCAATGGGGCCGATTCCCCGTTCTGCCCAAGAATTCGCAAGAAACCAGTTCCCCCAGAGCCACTGAAAAAAGGTAGGAAACC
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| DNA Sequence for Gene |
>X969_22460
GTGAACCCGGTAATCAAGACATTCCAGTTCGGTCAGTCGACCGTTACTCTCGAAACGGGCCGTATTGCCCGTCAGGCAACCGGCGCCGTGCTGGTTACCG TCGACAACGACGTCACCGTGCTGGTGACCGTGGTCGGTGCCAAACAGGCCGATCCAGGCAAGGGCTTCTTCCCGCTGTCGGTCCACTACCAGGAAAAGAC CTACGCCGCCGGCAAGATCCCGGGTGGCTTCTTCAAGCGTGAAGGCCGTCCTTCCGAGAAAGAGACCCTGACCTCGCGCCTGATCGACCGTCCGATCCGT CCGCTGTTCCCGGAAGGCTTCATGAACGAAGTGCAGGTTGTCTGCACCGTGGTTTCCACCAGCAAGAAGACCGACCCGGACATCGCTGCGATGATCGGTA CCTCGGCCGCCCTGGCCATCTCCGGCATTCCTTTCGAAGGCCCGATCGGCGCCGCTCGCGTTGCCTTCCACGAAAGCACCGGCTACCTGCTGAACCCGAC CTACGAGCAACTGGCTGCCTCGAGCCTGGACATGGTCGTTGCCGGTACCGAATCGGCTGTACTGATGGTTGAGTCGGAAGCCAAAGAGCTGACCGAAGAC CAGATGCTGGGCGCCGTGCTGTTCGCCCACGACGAATTCCAGGCCGTGATCCAGGCCGTCAAGGAACTGGCTGCCGAAGCCGGCAAGCCGACCTGGGACT GGCAGCCAGCCCCGGCCAACGTCGAGCTGATGAACCTGGTACGCGCCGAGTTCGGCGAACCCGTTTCGCAGGCCTACACCATCACCCAGAAGGCTGACCG CTACAATCGCCTGGGCCAGCTGCGCGACGAGGCTGTTGCCCGTCTGAGCAACGAAGAGACCGGCCCGTCCGCCGGCGCCATCAAGGAAATCTTCGGCGAG CTGGAATACCGCACCGTCCGTGAGAACATCGTCAACGGCAAACCGCGTATCGACGGCCGTGACACCCGCACCGTGCGCCCGCTGAACATCGAAGTCGGCG TCTTGCCAAAGACTCACGGTTCGGCGCTGTTCACCCGTGGCGAAACCCAGGCCCTGGTCGTTGCGACCCTGGGTACTGCCCGTGACGCCCAGCTGCTGGA CACCCTGGAAGGCGAGAAAAAAGACCCGTTCATGCTGCACTACAACTTCCCGCCATTCTCGGTGGGTGAGTGCGGTCGCATGGGCGGCGCTGGCCGTCGT GAAATCGGCCACGGCCGCCTGGCCCGTCGTGGCGTGCAGGCCATGCTGCCGAGCGACAGCGAGTTCCCGTACACCATCCGCGTGGTATCGGAAATCACCG AATCCAATGGTTCCAGCTCCATGGCTTCGGTCTGTGGTGCTTCCCTGGCCCTGATGGACGCTGGTGTACCGATGAAGGCACCGGTTGCCGGTATCGCCAT GGGCCTGGTCAAGGAAGGTGACAAGTTCGCCGTCCTGACCGACATCCTGGGTGACGAAGACCACCTGGGCGACATGGACTTCAAGGTAGCCGGTACCGCC AAGGGTGTTACCGCGCTGCAGATGGACATCAAGATCAACGGTATCACCGAAGAGATCATGGAGATCGCCCTGGGCCAGGCCCTGGAAGCGCGCCTGAATA TCCTCGGCCAGATGAACCAGATCATCGCCCAGTCGCGTAGCGAGCTGTCGGCCAACGCCCCGACCATGATCGCGATGAAGATCGACACCGACAAGATCCG TGACGTCATCGGTAAAGGCGGCGCCACCATTCGCGCCATCTGCGAAGAGACCAAGGCTTCGATCGACATCGAAGACGATGGCTCGATCAAGATCTTCGGC GAAACCAAGGAAGCGGCAGATGCTGCCAAGCAACGCATCCTGGGCATTACCGCCGAAGCCGAGATCGGCAAGATCTACGTCGGCAAGGTCGAGCGCATCG TCGACTTCGGTGCGTTCGTAAACATCCTGCCTGGCAAGGACGGCCTGGTGCACATCTCCATGCTGAGCGATGCTCGCGTCGAGAAAGTCACCGACATCCT GAAAGAAGGCCAGGAAGTCGAAGTACTGGTACTGGACGTGGATAACCGCGGCCGTATCAAGCTGTCGATCAAGGACGTTGCCGCGGCGAAGGCCTCGGGC GTCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGACCGCCACGCAACAGGAAAAGGGCCCTTCGGGGCCCTTTTTTCATGGGCGAAAGGGAACCTTTTGCGGACTTGCATCTTGCATGCAGGTTTACCGTG CAGATTGCAAAATGCACGACGACGGGAATGCTGGTTTTTCGCTAACTTATTGATTTGAAAGGAAACAAGCGAGACGGAAAAGCTGGCACAGCGCATGCAA CTACCTCCATATCTGACGCCAGGACATACGGCGCAGACCTTTCGAAAAACAGGAGTGACTCACATGAAGAAGTTCGCCATTGCTGCCGCTACTGCTACCG CCCTGACCATGGCTAACGGCGCATTCGCTGCGGAGCCAACCCAGGCTCCAGTCATGTTGGCTGCCAACACCGTGGATAACGCCAAGCAGGAAGGTTCCGA CACCTGGATCACTACCAAGGTGAAAGCGGACCTGCTGACTGAAAAAGGTATTCCAGGCAGCGACATCAAAGTCGAGACCAGCCAAGGCGTCGTCTCGCTG
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| Amino Acid Sequence |
>polynucleotide phosphorylase/polyadenylase
MNPVIKTFQFGQSTVTLETGRIARQATGAVLVTVDNDVTVLVTVVGAKQADPGKGFFPLSVHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIR PLFPEGFMNEVQVVCTVVSTSKKTDPDIAAMIGTSAALAISGIPFEGPIGAARVAFHESTGYLLNPTYEQLAASSLDMVVAGTESAVLMVESEAKELTED QMLGAVLFAHDEFQAVIQAVKELAAEAGKPTWDWQPAPANVELMNLVRAEFGEPVSQAYTITQKADRYNRLGQLRDEAVARLSNEETGPSAGAIKEIFGE LEYRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTARDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRR EIGHGRLARRGVQAMLPSDSEFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGDKFAVLTDILGDEDHLGDMDFKVAGTA KGVTALQMDIKINGITEEIMEIALGQALEARLNILGQMNQIIAQSRSELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG ETKEAADAAKQRILGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARVEKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASG V
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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