Strain | Pseudomonas monteilii SB3078, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GTGAAGCCTTCAACATGCTCGAAAGCGGCCGCGCCGTGGCCTTCATGATGGACGACGCCCTGCTCGCCGGCGAAATGGCCAAGGCTCGCAAACCGTCGGA CTGGGTCATCACCGGTACCCCGCAGTCCTACGAGATCTACGGCTGCATGGTGCGCAAGGATGACGCGGCCTTCAAGAAAGCGGTCGATGACGCCATCGTC GGCTACTTCAAGTCGGGCGAAGTCAACAAGAGCTACGACAAATGGTTCCAACAGCCAATCCCGCCGAAGGGTCTGAACCTGCAGTTCCCGATGAGCGACG AGCTGAAGAAACTGATCGCCGAGCCAACCGACAAGGCTGCCGACGAGAAAAAGTCCTGACCACCAGCCCATGGCCTGTTGCGCTGCAAAGCGCGAATTAA ACCTGCAGGCCACCCGTTAGTGTCTAACCTTTCATCCGAGGGCTTATGCCCTCGGATGTTGGAAGGTGCCCGTGAAACAACCGTCTGAGGGGAAATCCCG
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DNA Sequence for Gene |
>X969_20595
ATGAATTACAACTGGGACTGGGGCGTGTTCTTCAAGTCCACCGGCGTGGGCAGCGAAACCTATCTGGACTGGTACGTCACCGGCCTGGGCTGGACCATCG CCATCGCCATCTCCGCCTGGGTCATCGCCTTGCTGCTGGGCTCGGTCCTCGGTGTCATGCGCACCGTGCCGAACCGTTTGGTATCGGGTATCGCCACCGC CTATGTGGAGCTGTTCCGCAACGTACCGCTGCTGGTGCAGCTGTTCATCTGGTACTTCCTGGTGCCAGACCTGCTGCCAGAAGGCCTGCAGGAATGGTTC AAGCAGGACCTCAACCCGACCACTTCGGCGCTGATCAGCGTGGTCATCTGCCTGGGCCTGTTCACTGCCGCCCGCGTGTGCGAGCAGGTGCGTACCGGCA TCCAGGCGCTGCCCCGCGGCCAGGAAGCCGCCGCCCGCGCCATGGGCTTCAGCCTGTCGCAGATCTACACCAACGTGCTGCTGCCACAAGCCTACCGGAT CATCATTCCGCCGCTCACCTCGGAATTCCTGAACGTGTTCAAGAACTCGTCGGTGGCGTCGCTGATCGGCCTGATGGAACTGCTGGCACAAACCAAGCAG ACCGCTGAGTTCTCGGCGAACCTGTTCGAGGCCTTCACCTTGGCCACGCTGATCTACTTCACCCTGAACATGGGCCTGATGCTGCTGATGCGCATGGTCG AGAAGAAAGTCTCGGTGCCCGGCCTGATTTCCGTAGGGGGCAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATGGACATGGATTTCAGCGAAATCATCCCGGCCCTGCCTGCCCTTTGGGAAGGCATGGTCATGACCCTGCAGCTGATGATAATGGGCGTGGTTGGCGGCA TTGTACTGGGGACCATCCTGGCCCTGATGCGCCTGTCGTCGAGCAAGCTGCTGTCGAACGTGGCCGGCGCCTACGTCAACTACTTCCGCTCGATCCCGCT GCTGCTGGTAATCACCTGGTTCTACCTGGCGGTACCATTCGTGCTGCGCTGGATTACCGGCGAGGACACCCCGGTAGGTGCCTTCACCTCCTGCGTGGTG GCATTCATGATGTTCGAGGCCGCGTACTTCTGCGAAATCGTCCGCGCCGGCGTGCAGTCGATCTCCAAAGGCCAGATGGGCGCCGCCCAGGCCCTGGGCA TGACCTACGGCCAGACCATGCGCCTGATCATCTTGCCCCAGGCCTTCCGCAAGATGACGCCGCTGCTTTTGCAGCAGAGCATCATCCTGTTCCAGGACAC
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Amino Acid Sequence |
>amino acid ABC transporter permease
MNYNWDWGVFFKSTGVGSETYLDWYVTGLGWTIAIAISAWVIALLLGSVLGVMRTVPNRLVSGIATAYVELFRNVPLLVQLFIWYFLVPDLLPEGLQEWF KQDLNPTTSALISVVICLGLFTAARVCEQVRTGIQALPRGQEAAARAMGFSLSQIYTNVLLPQAYRIIIPPLTSEFLNVFKNSSVASLIGLMELLAQTKQ TAEFSANLFEAFTLATLIYFTLNMGLMLLMRMVEKKVSVPGLISVGGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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