Strain | Pseudomonas monteilii SB3078, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGGCAGCGAACCGCACCGCCAGCTGCAAGCCGCCGGCCTGACCCAGCGCCTGTTCGCCCTGGAAGAAGACGTGCAGGCCCGCGCGGTCGGCAACGAGCTG GCCAAGGCCCTGGACTACCCCGGGTTCGTCGAACTGTCGCTGCATTACGACAAGGTCAACAGCTGGCTATGAATACCCTCAACGTTGGCGATCAGGCGAT CGCCCTGGACAAGGACGGCTTCCTGGTCGACCTGCAAGACTGGTCGCATGCCGCCGCCGAGGCTTTGGCCGCGCGCGAGGGCATCCCTTTGACGGCGGAC CACTGGGAAATCCTCGAACTGCTGCGCCAGTTCTACCAGGAATTCCAGCTGTCCCCGGCCACGCGCCCGCTGATCAAGTACACGGCCCTCAAACTGGGCC CGGACAAGGGCAACAGCTCGCACCTCAACCGCCTGTTCAACGGCACTCCCGCCAAACTGGCCGCCAAGCTGGCGGGCCTGCCCAAGCCGACCAACTGCAT
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DNA Sequence for Gene |
>X969_16230
ATGACAGAACCTCGCCCGCTTACCCTGGAAACCCCTGCCGAACACCCGTTCGCCGAGTTCGTGCGCATTCTTGGCAAAGGCAAGCGCGGCGCGCGTGGCC TGACCCGTGAAGAAGCCCGCACGGCCATGACCCTGCTGCTGGAAGGCAAGGTCGAAGATGCCCAGCTCGGTGCCTTCCTCATGCTGCTGCGGCACAAGGA AGAAAGCGCCGAAGAACTGGCCGGCTTCACCGAGGCCCTGCGCGCCCACTTGCAGTCGCCGCGCATCGCCGTGGACCTGGACTGGCCCACCTACGCCGGC AAGAAGCGCCACCTACCCTGGTACCTGCTGGCTGCCAAATGCCTGGCCAACAATGGCGTGCGCATCCTCATGCACGGTGGCGGTGCACATACCGCCGGGC GCATGTACACCGAGCAGTTGCTGTCCTTGCTGGAAATTCCGTTGTGCCGTGACTGGGCTGCGGTCAGCCGGGCCCTGGATCAGCAACGCCTGGCCTTCTT CCCGCTGCAGGACTGGGCGCCGCAGTTGCAGCGCATGATCGACCTGCGCAACACCCTGGGCCTGCGTTCGCCCATCCATTCGCTGGCCCGGGTGCTCAAC CCGCTGGCTGCGCGTTGTGGCCTGCAGAGCATCTTCCACCCCGGCTACCAGGCAGTACACCGCGAGGCCAGCCGCCTGCTGGGCGACCATGTCGTGGTAA TCAAGGGTGATGGCGGCGAGATCGAGGTCAACCCCGATGTCATCAGCCATCTATACGGCACCACCGCCGGCGAAGCCTGGGACGAGGAGTGGCCAGCGCT GAGCGAACGCCGCCACGTGAAGCCGGCAAGCCTGCAGCCGGAGCAATTGCTGGCGGTCTGGCGCGGCGAGACCGAGGACAGCTACGGTGAGATGGCCGTG GTCGCAACCATCGCCCTTGCCCTGCGCGGCCTGGGCCAAGACCGTGAGCAGGCTTTCGCCACGGCACGCGGTTACTGGGGCGCACGCAACCAATCTAATA ACTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ATAGTAAGAGCGCAGTCTTTGCGCTAGTTATTCGAACGTTTTTCCCTAGACTGGGCTCCAACGACAAACAACTTTGTTCCGAGGAGCTCACCATGGGCCT TTTGATCGACGGCCGCTGGCATGACCAGTGGTATGAGAACGGCAAGGACGGCACGTTCAAACGCGAAAACGCCCAACGCCGCAATCAGCTGCCCGCTCCC GAAGCTGGCCGTTACCACCTGTACGTCTCGCTAGCCTGCCCCTGGGCGCACCGCACCCTGATCTTCCGTGCCCTCAAGGGCCTGGAGCCACTAATCGACG TGTCGGTGGTCAGCTGGCTGATGCAGGACCATGGCTGGACTTTCGACCAGCAGCAAGGTTCCAGCGGCGACCACCTCGACGCGCTGCAGTACCTGCACCA GCGCTACACCCAGGATGACCCGCACTACACTGGCCGCGTGACTGTACCGGTGCTGTGGGACAAGAAAGAGAAACGCATCGTCAACAACGAGTCGTCGGAG
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Amino Acid Sequence |
>hypothetical protein
MTEPRPLTLETPAEHPFAEFVRILGKGKRGARGLTREEARTAMTLLLEGKVEDAQLGAFLMLLRHKEESAEELAGFTEALRAHLQSPRIAVDLDWPTYAG KKRHLPWYLLAAKCLANNGVRILMHGGGAHTAGRMYTEQLLSLLEIPLCRDWAAVSRALDQQRLAFFPLQDWAPQLQRMIDLRNTLGLRSPIHSLARVLN PLAARCGLQSIFHPGYQAVHREASRLLGDHVVVIKGDGGEIEVNPDVISHLYGTTAGEAWDEEWPALSERRHVKPASLQPEQLLAVWRGETEDSYGEMAV VATIALALRGLGQDREQAFATARGYWGARNQSNN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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