Strain | Pseudomonas monteilii SB3078, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CCGGCGGGCAGCGGCAGCGCCTGGCCATTGCCCGTGCGTTGCTGGTCGATGCGCCGATCCTGTTGCTGGACGAAGCCACCAGCGCACTCGACGCACAAAG CGAACACCTTATCCAGCAGGCGCTGCCCAGCCTGATGGCCGGGCGCACCACACTGGTGATCGCCCATCGTCTGGCTACGGTCCAGCATGCCGACCGTATC GCGGTCATCGACAAGGGCAGGCTGGTGGCGGTGGGGACGCATCGCCAGTTGATCGAAGAGAGCCCGCTTTATGCGCGGCTTGCGGCCTTGCAGTTCACCA CGGGGTAGCTTGTAGTGGCCTCGTAACATTTCTGTAGTACTTGCCTGAGAGTATCTAGCTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCCATTGCTTG ATGGCAGCCTTTTTTTGGCCTGCCCGTAACCGGGCTGCGTTGCGTCTTGTTGCCAGCTTGCGCGGCCCTCCGGTCTTCCTCCTGCTTTCCGAGATCCCAG
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DNA Sequence for Gene |
>X969_06475
ATGTTGCGTAAATCCCTCAGAGTGCAAATTCTCTCCCTGCTCGGCGGCAGTCTGGTGGCGATGTTGCTGATCGCCCTGGTGTGCTTCCAGTTCCTTTCGT CCAGCGTGCGCGGCTACGCCGAGCTGGTCGACGGGCCGCTGCGGGCCTCGCAGTTGATCGACGAAGCCAACCTGCAGTTCAAGATCCAGGTGCAGGAGTG GAAGAACGTGTTGTTGCGCGGGCGCCAGCCGGCTGACATGGACAAGTACTGGCAGCAGTTCCAGGCTCGCGAGCAGCAGGTGCAGCAACTGCTCGGGCAA TTGATCGACAGCAGCGACGCCAGGCTCAAGGCGCCGCTGCAGCAACTGCGTGACAGCCACCGGCAGCTGGGCCAGACCTATGCGCAGGGGCGCCAGGCAT TCCAGGCGGCGGGCGGCGACCCGGTGGCCGGCGATCTGGCGGTCAAGGGCGTGGACCGCGCCGTCAGCGAGCAGATGAGCGAACTGGTCGAGCAACTGCG TGCCGATGCCCGTCAGCACGCCGCCAGCCTCAGTGCCGGTGCCGAGCGCACGGTATGGCTGGGCTTGCTGGTGATGCTGGCCTCGGCCGTGCTGGTGGGG CTGCTCAGCCTGTGGCTGGTCAACCGCAGCCTGATCGAGCCGATCCGCCAGTTGATCGAGTATGTCGCGCAGCTGAGCCAGGGCCGCTTTGCCGCCCGGG TAGACAGCCGCCGTGAGGACGAACTGGGCCGCCTGGCGCGGGCCGCCAACACCCTGCGCGATTTCCTCGCCGACACGGTCGGCCGGCTGCAGGACAACGC CCAGGAACTGGAAGGCGCCAGCGGCCAGCTGCGCAGCATCGCCGGCGACATGGCCCGTGGTACCCACGACCAGTTCCAGCGCACCGACCAGGTGGCCACG GCCATGCACGAGATGTCCGCCACTGCCCAGGAAGTCGCCCGCCACGCCGCGGAGGCCGCCCGCGCTGCGGACGACGCCGATCACAGTGCCCAGGCGGGCG AGCAGGTGATGCAGCAGACCATCGACATCATCGGCGTGGTCAACCGCGAAATCGCTGGCACGGCGGCGGTGATTCGCGACCTTGAGCATGACAGCGCGCG CATTGGCAAAGTCCTTGAAGTGATCCGCGGCATTGCCGAGCAGACCAACCTGCTGGCGCTCAACGCGGCCATCGAAGCGGCCCGTGCCGGCGAGGCCGGG CGAGGTTTTGCGGTCGTCGCCGATGAAGTGCGCGGCCTGGCCCAGCGCACGGCGGCGTCGATCGCCGAGATCCACCAGATCATCGAGGCGGTGCAGTCGG GGGCGGTGGAGGCGGTCAAGGCCATCGAAAGCGGCCAGCAGCGCAGCGAGGAGGGTGCCGAGCAGGTGCAGCAGGCCGGGCAGATGCTGCAGCGCATCAC CCTGGCAGTGGAAGCGATCCGCGACATGAACCGGCAGATCGCCACGGCGGCCGAAGAGCAGACCAGCGTGGCCGAGGACATCTCCTGCAACCTGATCGAA ATCACCCGCATCGCCACGGCCAACCAGCAGGCGGTGCAGCATACCGAACAGGCGGGGCAGCGCCTGCATGGGTTGTCGGGGCAGCTGGGTGAAGTCACCT CCCGCCTCACCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCGGCTCTTGTGGGAGCGGCCTTGGGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGGTATCAGCATCCATGCAGAGATTGCCGGGGCCGCTTTGCGGCCC TTTTGCGACACAAGGCCGCTCCCACAACGGTACGGCGCCAGGTTGGCTACTGGGGAAACCCGCCACTTCCACTGCTTCATTCCATGCCCTCTGGCGGATT GCCGCCATCTATCCCGTCGCGCGCCCCCTGTATCCACTGCTCCAGACCCAGTTGGCACGTTCCCTGCTCAAGGCGGCGCGCGTGTACACAACAACTGGAT AACATCAATGAAGAAATTCCTGCTGACGTTCCTCTGCCTGGGCGTCATCGGCTGCTCCAAACCCGCGGAACCGGAAAAGACCGTCGACGTGCTGCTGATC GGCGGTGGCATCATGAGTGCCAGCCTGGGTACCTACCTCACCGAGCTGGAGCCCTCCTGGAAGATCGACGTCTATGAGCGCCTGGACCAGGTGGCCGAAG
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Amino Acid Sequence |
>methyl-accepting chemotaxis protein
MLRKSLRVQILSLLGGSLVAMLLIALVCFQFLSSSVRGYAELVDGPLRASQLIDEANLQFKIQVQEWKNVLLRGRQPADMDKYWQQFQAREQQVQQLLGQ LIDSSDARLKAPLQQLRDSHRQLGQTYAQGRQAFQAAGGDPVAGDLAVKGVDRAVSEQMSELVEQLRADARQHAASLSAGAERTVWLGLLVMLASAVLVG LLSLWLVNRSLIEPIRQLIEYVAQLSQGRFAARVDSRREDELGRLARAANTLRDFLADTVGRLQDNAQELEGASGQLRSIAGDMARGTHDQFQRTDQVAT AMHEMSATAQEVARHAAEAARAADDADHSAQAGEQVMQQTIDIIGVVNREIAGTAAVIRDLEHDSARIGKVLEVIRGIAEQTNLLALNAAIEAARAGEAG RGFAVVADEVRGLAQRTAASIAEIHQIIEAVQSGAVEAVKAIESGQQRSEEGAEQVQQAGQMLQRITLAVEAIRDMNRQIATAAEEQTSVAEDISCNLIE ITRIATANQQAVQHTEQAGQRLHGLSGQLGEVTSRLTA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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