Strain | Pseudomonas monteilii SB3078, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CAAGCAGATCGGACTGAAGCTGGACATCCGTGTGATGGAGTGGGCCGAAATGCTGCGCCGGGCCAAGAAGGGCGAGGCCGACCTGGTGTCCACCGGCTGG GCCGGCGACAACGGCGACCCGGACAATTTCCTCAGCCCGCTGCTCAGTTGCGATGCCGCCAAAAGCGGCGAGAACTATGCACGCTGGTGCAACCCCAAGT TCCAGGAGCTGATCAGCCGCGCCCGCGAAGTGATCGACAACGACGAGCGTGCAAGGCTCTATAACGAGGCATTGAAAGTGTACGATGACGAACAACCCTG GATCAGCATGGCCCATCCGAAGATGTTCACCGCCATGCGTGACAACGTGGAGGGCTACGTGATCAACCCTCTGACCAACAACAACTTCGCCACCACCAAG GTGAAGTAGAACAACAACGACCGCCGGCAACCCACACGGGAACCGGCGGCACCACCGTAGCGGGCTGATCGCCCCACGGCCTGATGAGGTAACCCCGACA
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DNA Sequence for Gene |
>X969_02975
ATGTTGAGCTTTATTGCCCGGCGCCTTGGCCTGCTGATACCGACCTTTTTCGGTATCACCTTGCTGACCTTCGCGCTCATACGCCTGATCCCCGGCGACC CGGTGGAAGTGATGATGGGCGAGCGCAGGGTCGACCCCGAAATGCATGCCCAGGCCATGGAGCGCCTGGGCCTGAACAAGCCGCTGCCGGTCCAGTACCT GGACTACGTCGGCAAGCTGGCCCAGGGTGACCTCGGTGAATCGCTGCGCACCCGCGAGAGCGTGTGGAGCGAGTTCCTCACCCTGTTCCCGGCCACACTC GAACTGGCCTTCGCCGCCCTGCTGTTCGCTGGCATCGTCGGCCTGCTGGCCGGGGTGATCGCCGCGCTCAAACGTGGTTCGCTGTTCGACCACGGGGTGA TGGGCATTTCGCTGGCGGGTTATTCGATGCCGATCTTCTGGTGGGGCCTGATCCTGATCATGTTCTTCTCGGTAAGCCTGGGCTGGACCCCGGTGTCCGG GCGCATCGACCTGCTCTACGACATCGAGCCGAAGACCGGCTTCATGCTCATCGACACCCTGCTCAGCGACGAGGAAGGTGCGTTCAAGGACGCGGTGATG CACCTGATCCTGCCGGCCATCGTGCTCGGCACCATCCCGCTGGCGGTGATTGCCCGCATGACCCGCTCGTCGATGCTCGAAGTGCTGCGCGAGGACTACA TCCGCACCGCCCGCGCCAAAGGCCTGTCGCCGGCACGCGTGGTGTTCGTGCACGGCCTGCGCAACGCGCTGATCCCGGTACTGACCGTATTCGGCCTGCA GGTCGGCACGTTGCTGGCCGGTGCGGTGCTGACCGAAACCATCTTTTCCTGGCCGGGCATCGGCAAGTGGCTGATCGAAGCCATCGGTGCCCGTGACTAC CCCGTGGTCCAGAACGGCATCCTGTTGATCGCCTGCCTGGTGATCCTGGTCAACTTCGTCGTGGATATCCTCTACGGCCTGGCCAACCCACGCATCCGTC ATCAGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCCTTCGCCATGACTAGCCCGATTCCGAAATCCGTCACGCCGGCCAGCCCGGTGGACCAGAGCCTGCTCTACCCCTCGCCATACAAAGAATTCTGGCAA GCCTTCGCCCGCAACAAAGGCGCGGTGATGGGCCTGGCCTTCATGTGCCTGGTAGTGTTCTGCGCGCTGTTCGCGCCGTGGGTTGCCCCGCACGACCCGA GCGAGCAGTACCGCGAATTCCTGCTGACCCCACCGGTGTGGCTCGAAGGTGGCAGCTGGCAGTTCATCCTCGGCACAGACGAGCTGGGCCGCGACCTGCT TTCGCGGCTGATCCAGGGCGCGCGGCTGTCGCTGCTGATCGGCCTGTCGTCGGTGGTGATGTCGCTGATCCCTGGCATCCTGCTGGGCCTGCTGGCCGGT TTCTTCCCGCAACTGCTAGGCCCGTCGATCATGCGCCTGATGGACGTGATGCTGGCCCTGCCCTCGCTGCTGCTGGCAGTGGCCATCGTCGCCATCCTCG
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Amino Acid Sequence |
>peptide ABC transporter permease
MLSFIARRLGLLIPTFFGITLLTFALIRLIPGDPVEVMMGERRVDPEMHAQAMERLGLNKPLPVQYLDYVGKLAQGDLGESLRTRESVWSEFLTLFPATL ELAFAALLFAGIVGLLAGVIAALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYDIEPKTGFMLIDTLLSDEEGAFKDAVM HLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTARAKGLSPARVVFVHGLRNALIPVLTVFGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARDY PVVQNGILLIACLVILVNFVVDILYGLANPRIRHQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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