Strain | Pseudomonas monteilii SB3101, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
ACCGGCCCGATGCTGCTCAAGGTGGTCACCCCGATCAGCGCCGAAGACACCGGCGGCAGCCTGCACGACCGCTTGGCCGAGATGGGCCCGCCCGCAGTCG TCCAGGCCATTGCCGGCCTGGCCGACGGTTCGCTGCAAGGCGAAGTGCAGGACGATGCCCTGGCCACCTACGCGCACAAGCTGAACAAGGACGAAGCGCG CATCGACTGGAGCCGCCCGGCCGTCGAGCTGGAACGCCTGATCCGTGCCTTCAACCCGTGGCCGGTTTGCCACAGCACCCTCGATGGCGAAAGCGTGAAA GTGCTGGCCGCCAACTTGTCCACAGCGACAGGCACCCCGGGTGAGATCCTCTCCGCCAGCAAGGACGGCCTGGTTGTCGCCTGCGGTGACCAGGCACTGA GCCTGACCCGCCTGCAACTGCCCGGCGGCAAGGCACTGAACTTCAGCGACCTGTTCAACAGCCGTCGTGAGAAATTCGCCAGCGGCAAGGTGCTGGGCCA
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DNA Sequence for Gene |
>X970_25990
ATGAACCCACGCCTCGCCGCCGCCCGTGCCCTTGCCGCTGTACTCAGTGGCAAGGCCTCGCTGAACAGTTCGCTGCCAGCGCAACTGGACAAGGTCGATG AGCGCGACCGCGGCCTGACCCAGGACCTGGCGTTCGGTACCGCGCGCTGGCAACCACGCCTCGACCTGCTGGCGGCGCAGCTGCTGCAGAAGCCGTTCAA GGCCGCCGATGCCGATGTGCAGGCGTTGCTGCTGGTCGGCCTGTACCAGCTGTTCTACAGCCGTATCCCGGCCCACGCGGCCATTGGCGAGACCGTTGGC TGTGCCGACAAGCTGAAGAAGCCGTGGGCCAAGGGCCTGCTCAATGCCGTGCTGCGCCGCGCCCAACGCGAAGGCGAAGAATTGCTGGCCGGCATGGAGC GCGACCCGGTGGTACGCACTGCCCACCCGCGCTGGCTGCAGAAGTCGCTCAAGGCCTTCTGGCCGGAGCAGTGGGAGGCCATCTGCGCCGCCAACAACGC CCACCCGCCGATGATCCTGCGGGTCAACCGTCGCCACCACAGCCGCGATGCCTACCTGGCACTGCTGACCGAGGCAGGCGTTGGCGCCAGCGCCTGCCAG TACAGCCGTGACGGTATCGTGTTGGCCGAAGCCTGCGACGTGCGCGGCCTGCCAGGCTTTGCCGAAGGCTGGGTGAGCGTGCAGGACGAAGCCGCGCAGC TGTCCGCCGACCTGCTGGAACTGGCCCCCGGCCAGCGCGTGCTCGACGCCTGCTGTGCACCGGGTGGCAAGACCTGCCACCTGCTGGAAGCCGAAACCGG CCTGGCCCACGTGGTGGCCATCGACCTCGAAGCCAAGCGCCTGACCCGCGTGCGCGAGAACCTCGACCGCCTGCAACTGGACGCCGAGCTGATCGCCTGC GATGCCCGCGACACCGCCAGCTGGTGGGACGGCAAGCCGTTCCAGCGCATTCTGCTCGATGCCCCCTGTTCGGCCACCGGCGTGATCCGCCGCCACCCTG ACATCAAGCTGACCCGTCAGGCCGACGACATCCCGGCCCTGGCCACGCTGCAAGGTGAGCTGCTCGATGCCCTGTGGCCGACCCTGGAAGTGGGCGGCAT GCTGCTATACGCCACCTGCTCCAGCCTGCCGACCGAGAACACCGAAGTGATCGATGCCTTCCTTGCCCGCACCCCGGGCGCCCGTGAGCTGGACCTGGCC ACCGAAGCCGGCCTGCGCCAGCCCCACGGCCGCCAGTTGTTGGCCCAGGAAGGCGGCCACGACGGTTTCTACTATGCCAAGCTGATCAAGATCGCCGCCT CGCGCGGATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAACAAAGGGTAGGGAGTAGCGGATGAAGATCATCATCCTCGGCGCAGGACAGGTAGGCGGTACGCTGGCGGAGCACCTGGCCAGCGAAGCCAACGACAT CACCGTGGTCGACACTGACGGCGACCGCCTGCGCGACCTGGGCGACCGCCTGGACATCCGCACCGTGCAAGGCCGCGGCTCGCTGCCTACGGTGCTGCGC CAGGCCGGTGCCGATGACGCCGACATGCTGGTGGCGGTAACCAACAGCGACGAAACCAACATGGTCGCCTGCCAGGTGGCCTATTCGCTTTTCCACACCC CGACCAAGATTGCCAGGGTGCGCGAGTCGGCCTACCTGACCCGCGAAGAGCTGTTCGACAACGACCATATCCCGGTCGACGTACTGATCAGCCCCGAACA GGTGGTGACCAACTACATCAAGCGCCTGATCGAGCACCCAGGCTCGCTGCAGGTGATCGACTTCGCAGAAGGCAAGGCCCAGCTGGTGGCAGTTAAGGCG
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Amino Acid Sequence |
>16S rRNA methyltransferase
MNPRLAAARALAAVLSGKASLNSSLPAQLDKVDERDRGLTQDLAFGTARWQPRLDLLAAQLLQKPFKAADADVQALLLVGLYQLFYSRIPAHAAIGETVG CADKLKKPWAKGLLNAVLRRAQREGEELLAGMERDPVVRTAHPRWLQKSLKAFWPEQWEAICAANNAHPPMILRVNRRHHSRDAYLALLTEAGVGASACQ YSRDGIVLAEACDVRGLPGFAEGWVSVQDEAAQLSADLLELAPGQRVLDACCAPGGKTCHLLEAETGLAHVVAIDLEAKRLTRVRENLDRLQLDAELIAC DARDTASWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQADDIPALATLQGELLDALWPTLEVGGMLLYATCSSLPTENTEVIDAFLARTPGARELDLA TEAGLRQPHGRQLLAQEGGHDGFYYAKLIKIAASRG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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