Pseudomonas monteilii SB3101, X970_23870
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas monteilii SB3101, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGCTGTGCGGTGGCGAGCGTCTGACCGCCGGTGATTTCGCCAAGGGTGCATTCGTGGCCCCGACCGTGTTCACCGACTGCACCGACGACATGACCATCGT CAAGGAAGAGATCTTCGGCCCGGTGATGAGCATCCTCACCTACGAAACCGAAGAAGAAGTCATCCGTCGTGCCAACGACACCGAGTACGGCCTGGCCGCC GGTGTCTGCACCAACGACATCACCCGCGCCCACCGCATCATCCACAAGCTGGAAGCCGGTATCTGCTGGATCAACGCCTGGGGCGAATCGCCGGCCGAAA TGCCGGTCGGTGGCTACAAGCAGTCGGGCGTCGGCCGTGAGAACGGCGTCAGCTCGCTGGCTCAATACACTCGCATCAAGTCGGTCCAGGTCGAGCTGGG CGGCTACAACTCGGTCTTCTAAGGCCCTGTCCAGCCACGCCCGTGCCTCAGCGCACGGGCGTTCCTGCTCCCTGAACACCGCCAACACGAGGGTACTTTC
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| DNA Sequence for Gene |
>X970_23870
ATGTCCCAAGAATTCGATTACATCATCGTCGGTGCCGGTTCGGCCGGTAACACCCTGGCGACCCGCCTGACCGAAGACGCAGGCGTCACCGTATTGCTGC TGGAAGCCGGTGGCCCCGACTACCGCTTCGACTTCCGCACCCAGATGCCAGCAGCCCTGGCCTTCCCGCTGCAGGGCCGCCGCTACAACTGGGCCTACGA GACCGATCCGGAGCCGTACATGGACGGCCGCCGCATGGAATGCGGTCGCGGCAAAGGCCTGGGTGGCTCGTCGCTGATCAACGGCATGTGCTACATCCGC GGTAATGCCCTGGACTTCGATGGCTGGGCAGAACTGCCAGGCCTGGAAGACTGGACCTATCTGGACTGCCTGCCGTACTTCCGCAAGGCCGAAACCCGCG ACATCGGCCCGAACGACTACCACGGTGGCGAAGGCCCGGTCAGCGTGACCACGCCGAAAGCCGGCAACAACCCGCTGTTCCACGCCATGGTCGAAGCCGG CGTGCAGGCCGGTTACCCGCGCACCGAAGACCTGAATGGCTACCAGCAGGAAGGCTTCGGCCCGATGGACCGTACGGTGACCAAGAACGGCCGCCGCTCC AGCACCGCCCGCGGCTATCTGGACCAGGCCAAGAAGCGCCCGAACCTGACCATCGTCACCCACGCCCTGACTGACCGCGTGCTGTTCGACGGCAAGCGCG CCATCGGCGTGACCTACCTGGTCGGTGACAGCGAAGAGCGCGTTGAAGCCCGTGCCCGCAAGGAAGTCATCGTCAGCTCCGGCGCCATCGCTTCGCCGCA GCTGTTGCAGCGCTCCGGCGTTGGTCCGCGCGCCCTGCTGGAAAGCCTCGACATCCCGGTGGTGCACGATCTGCCAGGCGTTGGCGAAAACCTGCAGGAC CACCTGGAGCTGTACCTGCAGTACGCCTGCACCCAACCGGTGTCGCTGTACCCATCGTTGCTGTGGTGGAACCAGCCGGCCATCGGTGCCGAGTGGATGT TCAACGGCACCGGCATCGGCGCCAGCAACCAGTTCGAGGCCGGTGGTTTCATTCGTACCCGCCCTGAATTCAAATGGCCGAACATTCAATATCACTTCCT GCCAGTGGCCATTAACTACAACGGCTCCAATGGCGTGAAGGAACACGGCTTCCAGGCACACATGGGTTCCATGCGCTCGCCTGCCCGCGGCCGCATCCAG GCCAAGTCGAAGGACCCGCGCCAACACCCGAGCATTCTGTTCAACTACATGTCCACCGAGCAGGACTGGCAGGAATTCCGTGACGGCATCCGCCTGACCC GTGAAATCATGGCCCAGCCGGCACTGGACCCGTACCGTGGCCGTGAGATCAGCCCCGGCGCGCACGTGCAGACCGATGAAGAGCTGGACAAGTTCATCCG CGAGCACGCCGAAACCGCCTTCCACCCGTCCTGCTCGTGCAAGATGGGCACCGACGACATGGCGGTGGTCGACGGCGAAGGCCGCGTGCATGGCATGAAG GGCCTGCGTGTGGTCGATGCGTCGATCATGCCGCTGATCATCACCGGTAACCTCAACGCCACCACGATCATGATCGCCGAGAAAATCTCGGACAAGATCC GTGGCCGCAAGCCGCTGCCGCGCAGCACTGCCAAGTACTACGTGGCGGGCGATGCACCGGTGAAGGGCAAGCCGATGCGCGAGGTCAAGCAGGCGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCTGCACCGGCCTCTTCGCGGCTAAAGCCGCTCCCACAGGGCTCACACAGGTTTTGAAACTGTGCAGTACCTGTGGGAGCGGGTTCACCCGCGAAAGGG CCCGCCCAGGCAACACCCGAAAAGGCACCCACCGCGGTGCCTTTTTTTCATCTGCAGAAACGCTTTACAGCCTGCCAATTCATCAGGTTAGAATCATTTG GCACGCGACCTGCTAGCGTCATGCTATCAAGTCCCCTCCCCCGCGGTCCCCGGAGTACCTGCCTTTGGATGCAAGCACCATCAACAGCCTGTTCCTGATC GGCGCATTGCTGGTGGGCGCAAGTATCCTGGTCAGTTCGCTGTCGTCGCGCCTGGGCATCCCTATCCTGGTCATCATCCTTGCGGTCGGCATGATCGCCG GCGTCGATGGTGGCGGCATCATCTTCAACAACTATCCGACCGCCTACCTGGTGGGCAACCTGGCGCTGGCCGTGATCCTGCTCGACGGTGGCCTGCGCAC
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| Amino Acid Sequence |
>choline dehydrogenase
MSQEFDYIIVGAGSAGNTLATRLTEDAGVTVLLLEAGGPDYRFDFRTQMPAALAFPLQGRRYNWAYETDPEPYMDGRRMECGRGKGLGGSSLINGMCYIR GNALDFDGWAELPGLEDWTYLDCLPYFRKAETRDIGPNDYHGGEGPVSVTTPKAGNNPLFHAMVEAGVQAGYPRTEDLNGYQQEGFGPMDRTVTKNGRRS STARGYLDQAKKRPNLTIVTHALTDRVLFDGKRAIGVTYLVGDSEERVEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHDLPGVGENLQD HLELYLQYACTQPVSLYPSLLWWNQPAIGAEWMFNGTGIGASNQFEAGGFIRTRPEFKWPNIQYHFLPVAINYNGSNGVKEHGFQAHMGSMRSPARGRIQ AKSKDPRQHPSILFNYMSTEQDWQEFRDGIRLTREIMAQPALDPYRGREISPGAHVQTDEELDKFIREHAETAFHPSCSCKMGTDDMAVVDGEGRVHGMK GLRVVDASIMPLIITGNLNATTIMIAEKISDKIRGRKPLPRSTAKYYVAGDAPVKGKPMREVKQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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